Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03931 ATGCCATCACCACTAGAAGAAGCAAATCAGGCCAATAATTATGATGAGATTGCAGAGCTGACATGGGAAAATGGGCAGATATCAATGCATGGGCTCAGTGGGCTTGATCCAACTTCACAAAAAAAGCCAACATGGGTTAATAGGGCCCATGATACATTAGAGTCCATTGTTCAACAAGCCACATGCAAGAATAAAAAGTCAAAGTTGACCATAAAAGACAACCATGCTTATGTTGATGTTCCTACCACAACAAGCTCCATTGTTGCATCTTCAGGGGAACATCATCAAATGGTGCCAACACTTTCAAGGAAAAGATCACATTCTTCTTATTCCGATCAACAACAACATCGGAGAGATGTTAATTATGTTAGCATCAATAATACTAATAGGAAATGTGGTGTTGCTACTGCTAGTGTCACATTTTGTAGGGACAACAATGACGTCACAACCATGATGACGTGGCCTTCTCTTGACTCTGGTCCAAGAAGCTTAAAAAATGATAAGATTCTTGAGGAGGATTCTGCTTGTCAAAGTGGATCGGAAGTTCGGAATAATGAAAATGATAGAGATGGTGGGAAAGGTGAAACAGGGCAGAGCAAATCATCATCAGTTGTAAGGAGAAATAGAACTGCTGCCGTCCATAACCAATCAGAACGGAGAAGAAGAGATAGAATTAATCAGAAGATGAAAGCATTGCAGCGATTAGTGCCTAATGCAAATAAGACAGACAAAGCTTCAATGTTGGATGAGGTGATTAAGTACTTGAAACAACTTCAAGCACAGATAGAAATGATGATGAGTGTGAGCATGCCACAAATGATAATGCAACAACAACTTCAAATGTCTATGCTAGCAAGATCAATGGCAAACAATGCTCCAAATCCAATTAGGCCATTGTTTCCACAACTCATCCAACCAACAACAACAATTGGAGCTGCTAACACTGCCTCTGCTCCAATGTTTCTTGCACCTTCCTTGATGATTCCTTCAAGCACCAATGCTTCAATTCCTCTGCCTTCTGCTTCATATGGGGCTGCTACTTTTGCACAACCACTTAATATGGATATGTTGAACAACATGGCAGCATTTTACAGCCAACAGATGAATCATCATCAGAACAATCAAATCAAACCATAA 1137 0.4011 MPSPLEEANQANNYDEIAELTWENGQISMHGLSGLDPTSQKKPTWVNRAHDTLESIVQQATCKNKKSKLTIKDNHAYVDVPTTTSSIVASSGEHHQMVPTLSRKRSHSSYSDQQQHRRDVNYVSINNTNRKCGVATASVTFCRDNNDVTTMMTWPSLDSGPRSLKNDKILEEDSACQSGSEVRNNENDRDGGKGETGQSKSSSVVRRNRTAAVHNQSERRRRDRINQKMKALQRLVPNANKTDKASMLDEVIKYLKQLQAQIEMMMSVSMPQMIMQQQLQMSMLARSMANNAPNPIRPLFPQLIQPTTTIGAANTASAPMFLAPSLMIPSSTNASIPLPSASYGAATFAQPLNMDMLNNMAAFYSQQMNHHQNNQIKP 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03931 378 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 18 372 IPR031066 -
Arst8g03931 378 MobiDBLite consensus disorder prediction 90 119 - -
Arst8g03931 378 MobiDBLite consensus disorder prediction 90 108 - -
Arst8g03931 378 Pfam Helix-loop-helix DNA-binding domain 213 259 IPR011598 GO:0046983
Arst8g03931 378 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 207 271 IPR036638 GO:0046983
Arst8g03931 378 MobiDBLite consensus disorder prediction 196 211 - -
Arst8g03931 378 MobiDBLite consensus disorder prediction 173 225 - -
Arst8g03931 378 CDD bHLH_AtPIF_like 209 266 IPR047265 -
Arst8g03931 378 Gene3D - 205 267 IPR036638 GO:0046983
Arst8g03931 378 SMART finulus 215 264 IPR011598 GO:0046983
Arst8g03931 378 Coils Coil 215 235 - -
Arst8g03931 378 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 209 258 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03931 Arst-Chr8 49544384 49548230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03931 16 271 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 37.358 9.71e-38 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst8g03931 HLH 1.4e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03931 - - aip:107624044 682.559