Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03910 ATGAAGGAAATTGATCTTCCATTTGGAGTCCCTAATTCATCCCATGGATTCTACCATGATCTCCATCACCATGTTGATCAATTTCATCAAGTGAATGTGAATGGCAATTCCTCATCATCAAATCATCAAGTTTCTCTAACAAATCTTGATTCCTTTGATGTCTATGAGTGCAAGCCTTTTGTGGAGAATAATAATGTTCATGTTATGGAGGATTTCCAATATAATGGAGGAGGTTTTGGTAATTTGAACCTCACTAATAACAATAATCAAAGTACTCCATTGGATATCATAGTTGGAAACCAAGGTTATTTACCATTTTATCCTCTTCAAGAGACCAAGCTTACAAATCTCGTTGTGCCGGATGAAGTCTCATCCATATCAACAATGGGTTATTACAAAAGGGTCAATGGTGTCAACAAAAACAATAAGTTATACCCAACGTCCAAGAAGACCTACAAACTTCAAAAGAAGTCTAACATAGTAAAGGGCCAATGGACAGAAAGCGAAGATAGCTTATTGATTCAGCTGGTAGAACAATATGGATTAAGGAAATGGTCTCATATTGCTCAAATGCTGCCTGGGAGAATTGGAAAACAATGTAGAGAGCGATGGCATAATCATCTAAGACCTAACATTAAGAAAGATATATGGACGGAAGATGAGGATAAGATCCTAATTGAAGCTCATGTGGAGATAGGAAACAAGTGGGCGGAAATTGCGAAAAGATTGCCTGGACGAACTGAAAACTCGATCAAAAATCATTGGAATGCTACCAAGAGAAGGCAATATTCAAAAAGGAAGTGTAGATCCAAGTACCCTAAAGCATCTCTCCTTCAAGAATACATCAAGAGTTTAAATTTGGACAAGAATCCTCTAATGGACTATAGGAGAAAATCTGTTAACCCTAGAGGCAATGCTAACAAAACTAGCTCGGCCGCTTCAAGCAAAGCACCACCACCACTTTCGGCGGCGCAACCTCAGCCGATAGGTAACAATAGTCAATTCTCTATGTCGGATCGATTGGTGCCGAGTTATGATTTCAATGAGGTATTGCCGGATTTTTGTTTTGATGAGAATTTGTTTGAAGGAGGGTGTAGCATTGATTCATTGCTTGATGACATTCCTTGTGCTCCTATTATGGATACTAGTACTATTAATGTTGTGGATAATGGTTTTGAGTGTGATGATATGCAACAAGAGATTGTGGAATCCATGATGGAGGGTGATGGAATAATCAAGAAGGAGATGGATTTGGTGGAGATGGTGACAAAGGTCAATAAAAATTGA 1287 0.3838 MKEIDLPFGVPNSSHGFYHDLHHHVDQFHQVNVNGNSSSSNHQVSLTNLDSFDVYECKPFVENNNVHVMEDFQYNGGGFGNLNLTNNNNQSTPLDIIVGNQGYLPFYPLQETKLTNLVVPDEVSSISTMGYYKRVNGVNKNNKLYPTSKKTYKLQKKSNIVKGQWTESEDSLLIQLVEQYGLRKWSHIAQMLPGRIGKQCRERWHNHLRPNIKKDIWTEDEDKILIEAHVEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQYSKRKCRSKYPKASLLQEYIKSLNLDKNPLMDYRRKSVNPRGNANKTSSAASSKAPPPLSAAQPQPIGNNSQFSMSDRLVPSYDFNEVLPDFCFDENLFEGGCSIDSLLDDIPCAPIMDTSTINVVDNGFECDDMQQEIVESMMEGDGIIKKEMDLVEMVTKVNKN 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03910 428 PANTHER MYB PROTEIN-RELATED 143 316 - -
Arst8g03910 428 MobiDBLite consensus disorder prediction 302 335 - -
Arst8g03910 428 Pfam Myb-like DNA-binding domain 217 256 IPR001005 -
Arst8g03910 428 Pfam Myb-like DNA-binding domain 162 208 IPR001005 -
Arst8g03910 428 ProSiteProfiles Myb-like domain profile. 157 208 IPR001005 -
Arst8g03910 428 FunFam Transcription factor MYB119 215 279 - -
Arst8g03910 428 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 213 263 IPR017930 -
Arst8g03910 428 SMART sant 161 210 IPR001005 -
Arst8g03910 428 SMART sant 213 261 IPR001005 -
Arst8g03910 428 FunFam Transcriptional activator Myb isoform A 161 214 - -
Arst8g03910 428 ProSiteProfiles Myb-like domain profile. 209 259 IPR001005 -
Arst8g03910 428 CDD SANT 217 259 IPR001005 -
Arst8g03910 428 SUPERFAMILY Homeodomain-like 159 255 IPR009057 -
Arst8g03910 428 Gene3D - 215 280 - -
Arst8g03910 428 Gene3D - 161 214 - -
Arst8g03910 428 MobiDBLite consensus disorder prediction 293 335 - -
Arst8g03910 428 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 157 212 IPR017930 -
Arst8g03910 428 CDD SANT 165 208 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03910 Arst-Chr8 49424358 49425925 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03910 53 375 MYB Transcription Factor Family AT4G18770 51.183 7.96e-97 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst8g03910 Myb_DNA-binding 1.1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03910 K09422 - qsa:O6P43_022705 447.973