Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03895 ATGCTGGTTTCGGAGTTTATAGGACGTTGCCTTCAAGATGTTGAAGGTTCTGCAGTCCAATGTAGCAATAGTCACTCTGTACCGTATTTGAAGGATTGGCATTTTGTAAAGGAGTATCCAGAATATGTAGCTTATAAAACTCCAATGTTCTTTTGTGATGATTGGCTTAACCTGTATCTTGACAACTACAGAATGCATACTGATTCTGACACATACCAAGAAAATAACGAAATATGTTGCTCTGACTATCGTTTTGTATACATGGGAGTTAAAGGATCTTGGACTCCTCTTCATGCCGATGTTTTCCGGTCATATAGCTGGTCGGCAAATGTTTGCGGAAAAAAGAGATGGCTTTTTCTAGATCCTTCCCAACATCATCTTGTATTTGACAGGAATATGAAAAATTGTGTATATAATATCTTTGATGAAGTATCTGACTCAAAATTTCCTGGTTTCAAAAAGGCTATCTGGTTAGAATGCATGCAAGAAGCAGGTGAAATTATATTTGTTCCCAGTGGATGGTACCATCAAGTTCATAATTTGGAGGATACAATATCTATAAACCACAACTGGTTCAATGCGTATAACCTTTCATGGGTGTGGAATTTACTTTTGAGGGACTACAATGAGGCCAAAGAATACATAGAAGACATCAAGGATGTATGTGAGGATTTCGAAGGTCTTTGCCAGCGCAATCTTGCTGCTAACACGGGGATGAACTTTTATGACTTCTTTACTTTCATATCACGCTTCACCTTGGCCAACATTGTCTTGCTTTGTTATATAAATGGAAGACATGGAAATATCACTCAAATCTCATCAACAATACCTCAGCATTTATTGATGAATCTTGGATCCATAAGGAAGGTTGCATTGGAGATGAAAGACAGGCATGCTCTAAAAGGAAATCAGGATCGCGCTGTGGACATTATAGAAACACTTGAAAATCCTAGGTTTTGCAAATTGTGCATGGATATAGGAAGAACATTTGCAATGATACATGAAGAGTCTCATTTGTCCTTTGATTTCGAGAGCGCTTCGGCTGGTGAAATAGCGGATCTCACTGTTTTGAAAGCATACACTTCATCTGAGTTCTACACACCTGAAGATCTTGTTGAATTTATAGACAATGCTGTTGCAGAACATGGTGACTGTTACATCAACTCATCTGTAATATAA 1179 0.38 MLVSEFIGRCLQDVEGSAVQCSNSHSVPYLKDWHFVKEYPEYVAYKTPMFFCDDWLNLYLDNYRMHTDSDTYQENNEICCSDYRFVYMGVKGSWTPLHADVFRSYSWSANVCGKKRWLFLDPSQHHLVFDRNMKNCVYNIFDEVSDSKFPGFKKAIWLECMQEAGEIIFVPSGWYHQVHNLEDTISINHNWFNAYNLSWVWNLLLRDYNEAKEYIEDIKDVCEDFEGLCQRNLAANTGMNFYDFFTFISRFTLANIVLLCYINGRHGNITQISSTIPQHLLMNLGSIRKVALEMKDRHALKGNQDRAVDIIETLENPRFCKLCMDIGRTFAMIHEESHLSFDFESASAGEIADLTVLKAYTSSEFYTPEDLVEFIDNAVAEHGDCYINSSVI 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03895 392 ProSiteProfiles JmjC domain profile. 36 208 IPR003347 -
Arst8g03895 392 SMART cupin_9 28 208 IPR003347 -
Arst8g03895 392 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 3 245 - -
Arst8g03895 392 Pfam JmjC domain, hydroxylase 86 191 IPR003347 -
Arst8g03895 392 SUPERFAMILY Clavaminate synthase-like 19 219 - -
Arst8g03895 392 Gene3D Cupin 1 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03895 Arst-Chr8 49286444 49290640 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03895 29 200 Glycosyltransferase AT1G78280 24.599 1.24e-11 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Arst8g03895 JmjC 1.3e-16 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03895 - - aip:107623961 808.905