Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03890 ATGAACATAAAAAAGGGTGAGATTGAGAAGATGAATTGGAAGAATTTGAGTTACAGTGAATTTGTGGAGAGATTCATGAAAAAAAACCAACCTTTGTTGCTCAATGGATTCTCGGAACATCACAATTGGAGAGCTTCAGTTGATTGGGTCACCCCTCTTGGCCACCCCAATTTTCAATTTTTCTCCACAAATTTTGGAGATTCCAAAGTTCAGGTTGCAGATTGTGACACAAGAGAGTTCACCGATCAGAAAAGGGAGGAGATGCTTGTTTCGGAGTTTATAGGACGTTGCCTTCAAGATGTTGAAGGTTCTGCAGTCCAATGTAGCAATAGTCACTCTGTACCGTATTTGAAGGATTGGCATTTTGTAAAGGAGTATCCAGAATATGTAGCTTATAAAACTCCAATATTCTTTTGTGATGATTGGCTTAACCTGTATCTTGACAACTACAGAATGCATACTGATTCTGACAAATACCAAGAAAATAACGAAATATGTTGCTCTGACTATCGTTTTGTATACATGGGAGTTAAAGGATCTTGGACTCCTCTTCATGCCGATGTTTTCCGGTCATATAGCTGGTCGGCAAATGTTTGCGGAAAAAAGAGATGGCTTTTTCTAGATCCTTCCCAACATCATCTTGTATTTGACAGGAATATGAAAAATTGTGTATATAATATCTTTGATGAAGTGTCTGACTCAAAATTTCCTGGTTTCAAAAAGGCTATCTGGTTAGAATGCATGCAAGAAGCAGGTGAAATTATATTTGTTCCCAGTGGATGGTACCATCAAGTTCAAAATTTGGTGTACACAGGGAAGGAACTAGAGAAAAGGTTATTCATTGTAATACTGAACACTATTAGTAATACGAACAAAGTTCCTCCCAGGCTGAGCCAACATACTGGGCATGACAGATTCAGGTTATGA 927 0.3819 MNIKKGEIEKMNWKNLSYSEFVERFMKKNQPLLLNGFSEHHNWRASVDWVTPLGHPNFQFFSTNFGDSKVQVADCDTREFTDQKREEMLVSEFIGRCLQDVEGSAVQCSNSHSVPYLKDWHFVKEYPEYVAYKTPIFFCDDWLNLYLDNYRMHTDSDKYQENNEICCSDYRFVYMGVKGSWTPLHADVFRSYSWSANVCGKKRWLFLDPSQHHLVFDRNMKNCVYNIFDEVSDSKFPGFKKAIWLECMQEAGEIIFVPSGWYHQVQNLVYTGKELEKRLFIVILNTISNTNKVPPRLSQHTGHDRFRL 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03890 308 Pfam Cupin-like domain 20 268 IPR041667 -
Arst8g03890 308 ProSiteProfiles JmjC domain profile. 123 308 IPR003347 -
Arst8g03890 308 SUPERFAMILY Clavaminate synthase-like 17 270 - -
Arst8g03890 308 Gene3D Cupin 2 273 - -
Arst8g03890 308 SMART cupin_9 115 286 IPR003347 -
Arst8g03890 308 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 15 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03890 Arst-Chr8 49260337 49266942 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Arst8g03890 Cupin_8 2.5e-19 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03890 - - adu:107463569 664.07