Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03884 ATGGCTTCTTCTACTTCTTTTGCTTCTCTCTTACTCCCTCTTTACAACCCCGCTTTCCGACCAAAACCAACAACTTCTCTTCCCGCTTTTCGCTCCATTCACTCTTCTGTGCTCCCAGCTACTGATGGATCTCAAGCACCCCACAAGAGAACAAGAAGAATGGAAGGTCCTCGGAAAAGCATGGAAGATTCAGTTCAGCGCAAAATGGAGCAGTTTTATGAAGGGAAAGATGGGCCACCTCTCCGTGTTCTTCCGATTGGTGGGCTGGGTGAAATTGGGATGAACTGCATGCTGGTTGGGAACCATGATCGCTATATCCTCATTGATGCCGGAGTTATGTTTCCAGACTATGATGAACTTGGAGTCCAAAAGATCATACCTGATACAACATTTATAAGAAAATGGAGCCACAAAATTGAAGCACTTGTTATAACACATGGTCATGAGGATCACATTGGAGCGTTGCCTTGGGTCATTCCAGCATTGGATTCCAATACACCAATTTTTGCATCTTCCTTTACAATGGAGCTTATAAAAAAACGTCTGAAGGAGCATGGTATTTTTCTTCCATCTAGACTCAAGATATTTAGAACAAGAAAGAAGTTTATGGCTGGGCCATTCGAGATAGAACCTATCAGGGTGACCCATTCTATTCCTGATTGTTGTGGATTGGTTCTTCGCTGTTCTGATGGTACTATTCTTCACACTGGGGACTGGAAGATCGACGAGACACCTCTGGACGGGAAAGTTTTTGATCGCGAGGCTTTAGAGGAACTCTCTAAAGAAGGAGTAACACTGATGATGAGTGATTCAACCAATGTACTCTCACCTGGAAGGACAATAAGTGAATCTGTTGTTAAAGATGCATTATTGAGGCATATTTCAGCTTCTAAAGGAAGGGTTATTACCACCCAATTTGCATCAAATCTGCATCGACTTGGAAGTGTGAAAGCTGCTGCTGATTTAACTGGCCGAAAGTTGGTATTCGTTGGCATGTCTTTGAGGACATATTTAGATGCAGCTTGGAAGGATGGAAAGGCTCCAATTGATCCCTCCACTCTGGTGAAAGCAGAGGATATTGATGCTTATGCTCCAAAGGATCTGCTAATTGTAACAACAGGATCTCAAGCAGAACCACGTGCTGCCTTGAATCTTGCATCATATGGAAGTAGTCATGCTTTCAAACTAACTAAGGAAGATATTGTTTTGTATTCGGCCAAGGTTATCCCTGGTAATGAGTCGAATTGGCAATTTTTGCAGGAGGAAGTACTTCGAATTGTGAAGCCGCAACATTTTCTTCCCATACATGGAGAACTCTTGTTCTTGAAGGAGCATGAATTACTTGGAAAATCAAATGGCATTCGGCACACTGCTGTTATTAAAAATGGAGAGATGCTTGGTGTTTCACATTTGAGAAATAGGAGAGTCCTTTCTAATGGTTTCATTTCCCTTGGAAGAGAGAATTTACAGTTGAAGTACAGTGATGGCGACAAAGCATTTGGTACATCAAGCGACCTCTTCATTGATGAAAGATTGAAAATTGCATTAGATGGCATCATCGTGGTTAGCATGGAAGTTTTTCGCCCCCAAAGAGCAGAGAGTTTGGCTGAAAACACCTTAAATGGGAAGATAAGGATTACGACAAGATGCCTATGGCTTGACAAGGGAAAGTTATTGGATGCACTGCATAAAGCTGCTCATGCTGCTCTTTCAAGCTGCCCTGTAAAGTGTCCACTGGCTCACATGGAAAGAACTGTGGCCGAGGTCTTGAGGAAGATGGTGAGGAAGTACAGTGGTAAACGGCCTGAAGTTATTGTTATTGCCATAGAAAATCCAGCTGCTGTTCTTGCTGAGGAGATAAACACAAAGTTATCTGGCAAATCACATGTGGATCATGGAACATCAACATTAAGAAAAATAGTCGATGGGCACGGGAAGGAAAATCAGCCAGACACAACGCAAATAAGAGCTGATGCCAATGATGTTGAAGGACTTCTACCTGAGGAAGACACTGGTCCACCAACCGAAGAAGCCGAGGGTGATTTATCGGATTCAGAGGAATTTTGGAAGCCATTTATTGCATCCTCACCAGTTGAGAAGTCAATCAAAGCTAACAACGGTTATGTTCCACGAAAGGAGCACAAGTCTAATATTAAGAAAGATGATTCCGAAGACATTGGTGAAGCCAACTTTGTGAAAGCATCCAGTTCTGAACTCAAGTCGTCGAAGTCAGGGAAGAGGAATAAATGGAAACCTGAAGAAATTAAGAAGTTGATTAACATGCGCGGGAAACTACACGATAGATTTCAAATTGTGAAGGGAAGGATGGCTTTATGGGAAGAGATATCTCAGAGCTTGTTGGCTGATGGGATCAGCAGAAGTCCTGGACAGTGTAAATCGCTTTGGACATCTTTGGTACAGAAATATCAGGAGACCAAGAACGAGAAGGGTAGTAGCAAGAGCAGTTGGCAATATCTTGAGGACATGGAAAAGATAATGCCTGATAGTGAAGCAATGGCAACAAAATGA 2529 0.4263 MASSTSFASLLLPLYNPAFRPKPTTSLPAFRSIHSSVLPATDGSQAPHKRTRRMEGPRKSMEDSVQRKMEQFYEGKDGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDYDELGVQKIIPDTTFIRKWSHKIEALVITHGHEDHIGALPWVIPALDSNTPIFASSFTMELIKKRLKEHGIFLPSRLKIFRTRKKFMAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDETPLDGKVFDREALEELSKEGVTLMMSDSTNVLSPGRTISESVVKDALLRHISASKGRVITTQFASNLHRLGSVKAAADLTGRKLVFVGMSLRTYLDAAWKDGKAPIDPSTLVKAEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGSSHAFKLTKEDIVLYSAKVIPGNESNWQFLQEEVLRIVKPQHFLPIHGELLFLKEHELLGKSNGIRHTAVIKNGEMLGVSHLRNRRVLSNGFISLGRENLQLKYSDGDKAFGTSSDLFIDERLKIALDGIIVVSMEVFRPQRAESLAENTLNGKIRITTRCLWLDKGKLLDALHKAAHAALSSCPVKCPLAHMERTVAEVLRKMVRKYSGKRPEVIVIAIENPAAVLAEEINTKLSGKSHVDHGTSTLRKIVDGHGKENQPDTTQIRADANDVEGLLPEEDTGPPTEEAEGDLSDSEEFWKPFIASSPVEKSIKANNGYVPRKEHKSNIKKDDSEDIGEANFVKASSSELKSSKSGKRNKWKPEEIKKLINMRGKLHDRFQIVKGRMALWEEISQSLLADGISRSPGQCKSLWTSLVQKYQETKNEKGSSKSSWQYLEDMEKIMPDSEAMATK 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03884 842 CDD GT1 748 813 - -
Arst8g03884 842 MobiDBLite consensus disorder prediction 706 723 - -
Arst8g03884 842 MobiDBLite consensus disorder prediction 640 686 - -
Arst8g03884 842 Gene3D - 750 811 - -
Arst8g03884 842 MobiDBLite consensus disorder prediction 38 64 - -
Arst8g03884 842 PANTHER RIBONUCLEASE J 15 415 - -
Arst8g03884 842 SMART Lactamase_B_5a 93 293 IPR001279 -
Arst8g03884 842 MobiDBLite consensus disorder prediction 46 64 - -
Arst8g03884 842 PANTHER RIBONUCLEASE J 15 415 - -
Arst8g03884 842 Gene3D - 85 281 IPR036866 -
Arst8g03884 842 CDD RNaseJ_MBL-fold 84 466 - -
Arst8g03884 842 ProSiteProfiles Myb-like domain profile. 742 806 IPR001005 -
Arst8g03884 842 MobiDBLite consensus disorder prediction 704 723 - -
Arst8g03884 842 Pfam Myb/SANT-like DNA-binding domain 747 832 IPR044822 -
Arst8g03884 842 SUPERFAMILY Metallo-hydrolase/oxidoreductase 81 466 IPR036866 -
Arst8g03884 842 Pfam Beta-lactamase superfamily domain 104 240 IPR001279 -
Arst8g03884 842 Gene3D - 282 423 IPR042173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03884 Arst-Chr8 49199752 49207331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03884 749 833 Trihelix Transcription Factor Family AT2G38250 33.721 3.53e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Arst8g03884 Lactamase_B_2 8.6e-10 CL0381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03884 - - gmx:100783850 1318.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g03884 8 49199752 49207331 Arst8g03884 8 49199752 49207331 ECH
Arst1g02193 1 56325111 56333924 Arst8g03884 8 49199752 49207331 PCT