Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03881 ATGGTTACTGTTGTTTCTGGAAATGACCAGCGTGAGGGGAATGCTGTAGCTGTGCTTGAAAGTACTGGCAGCAAAGGATCTGTGCTAGTAAATGGAACGCTCGTCAAGAAGAGTACCAGCTGTGTGCTTAACTCGGGTGATGAGGTGGTTTTTGGTTTGCTGGGAAATCATGCTTATGTTTTTCAGCAACTGCATCCTGAAACCGCAGTTAAGGGTGCAGAAGTTCAGAGTGGTGGTGGGAAGTTACTGCAGATTGAAAAGAGAACAGGTGACCCTTCAGCCGTAGCTGGGGCTTCTATTTTGGCTTCTTTGTCTAGCTTTAGGCAGGATCTTACAAGATGGAAGTCTCCATCTCAGTCTGCCAGTAAGCCTCACCAGGGTACTGACGTTTCAGAGAGTGAGCTTGATGGCATGGAAGGCAACTCAACTCCAAATGAAGGGACTGACAAAGCCACTGATACTGGAGCAAGCGACAAGAATTCTCCTATGGATTGCGAACCAGATGATGCAGTCACAGAGGCAGGCAATGTAAAAATCTCTGGGGTGAATGATTTCCTAAGGCCTTTCTTCCGGGTCCTTGCCGGATCTAGTTGTAAACTGAAATTGAGCAAAAGTATCTGTAAACAGGTGTTGGAAGAAAGAAACGGGGCGAGGGATACACAAGCTGCATCATCTTCGGGTACATCTGTGCGCTGTGCAGTTTTTAAAGAAGATCTTCATGCTGCAATACTGGACGGGAAAAACCTAGATGTGTCCTTTGACAACTTCCCATATTATTTGAGTGAGAATACAAAAAATGTCTTGGTTGCAGCTTGCTTTATACACCTGAAAAATAAGGAACATGTAAAGTACACAACAGATTTTACAACCATAAACCCCCGAGTTCTGCTCTCAGGACCTGCAGGATCAGAAATATATCAGGAAATGTTGGCAAAAGCACTTGCAAAATATTTTGGAGCTAAATTGCTTATATTTGATAGCCATTTACTTCTGGGTGGTTTATCTTCTAAGGAAGCCGAGTTGCTCAAAGAGGGATCCAATGCTGAGAAATCATGCATCTGCACTAAACAAAGTCCTACAGCTACAGACGGGGCTCGTAGTATGGATCCATCAACTAGTGAACCTGATACGCCTAGCTCCTCAAATGCACCTACATTTGGCGTTGAGTCTCAACCTAAGATGGAAATTGATAGCGCACCTTCTACCTCCGGAGCCTCTAAGAGTGGTACATTTAAGCTGGGGGATCGGGTAAAATATAGCTTTTCATCTTCTGGTAGCCTTTATCAGACATCTTCAAGGTACAGGGGGCCATCTAATGGAAGTCGGGGGAAGGTTGTCTTACTTTTTGATGATAATCCCTTGTCAAAAATTGGTGTAAGATTTGATAAACCCATAACTGATGGAGTTGATCTTGGAGGTGCCTGTGAGGCTGGTCAAGGATTTTTCTGCAACGCAAGTGATCTTCGTTTGGAAAACACTATTGTTGAAGAACTGGACAAATTACTTATTAATACATTGTTTGAGGTTGTGAATAGTGAGAGCCGAAGTACGCCTTTCATTTTGTTCATGAAAGACGCAGAGAAGTCTATAGTAGTTAACGGGGATCCATATTACTTTAAAAGTAAGCTTGAAAAGCTTCCTGACAACGTGGTCGTAATAGGTGCACACACGCACACTGACAGCCGAAAGGAGAAGTCACATCCTGGAGGTTTGCTTTTTACAAAGTTTGGGAGCAATCAGACTGCGCTACTTGACTTGGCTTTCCCTGATAGTTTTGGAAGATTACATGACAGAGGCAAAGAAGTACCTAAACCAAACAAAACTTTGACTAAGCTTTTCCCAAATAAAGTTACAATTCATATGCCACAGGATGAGGCACTTCTAGCATCTTGGAAGCAGCAACTTGATCGAGACGTTGAGACTCTCAAAATCAAAGGAAATTTGCATCAATTGCGCTCTGTTTTGAGCCGTTGTGGGATGGAGTGTGAAGGACTTGAGACCGTGTGCATTAAGGATCAGACACTTACAAATGAAAATGCAGAAAAGATAGTTGGTTGGGCTTTGAGCCATCACCTCATGCAGAATTCTGAAGCTGATCCTGATGCAAAGCTTGTTCTATCTTGTGAGAGCATCCAGTATGGTATTGGGATCTTACAGTCTATCCAAAATGAGTCAAAGAGCCTAAAGAAGTCTCTTAAGGACATTGTAACAGAAAATGAGTTTGAAAAGAGGCTTTTAGCTGATGTTATTCCACCTAGTGACATTGGTGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGATACGCTGAAGGAGTTAGTGATGCTTCCTTTACAAAGGCCTGAGCTCTTTTGCAAGGGGCAATTAACCAAGCCGTGCAAGGGCATCTTATTATTTGGGCCCCCTGGAACAGGTAAGACAATGCTTGCAAAGGCAGTTGCTACTGAAGCTGGTGCAAACTTCATCAACATTTCCATGTCAAGCATCACATCCAAGTGGTTTGGTGAGGGTGAGAAATATGTAAAAGCTGTTTTCTCCCTGGCAAGTAAAATTGCACCTAGTGTTATATTTGTTGATGAGGTTGATAGCATGTTGGGCCGAAGGGAAAATCCTGGGGAGCACGAGGCCATGCGAAAAATGAAAAATGAATTTATGGTGAACTGGGATGGCTTACGTACAAAGGATACCGAGCGAGTTCTTGTGCTTGCAGCCACTAATAGGCCTTTTGACCTTGATGAGGCTGTCATAAGGAGGCTGCCACGAAGATTAATGGTAAATTTGCCAGATGCTCCTAATAGAGCAAAGATATTGAAAGTTATTTTGGCAAAAGAGGACTTGTCTTCCGATATTGATTTTGATGCAATCGCAAATATGACCGAGGGGTATTCTGGAAGTGATCTTAAGAATTTGTGTGTAACTGCTGCGCACCGTCCGATTAAAGAGATATTAGAAAAGGAGAAAAAGGAGCATGCTGCTGCTCTGGCAGAGGGTAGACCTGCTCCAGCATTAAGTGGAAGTTCCGATATCAGGTCACTAAACATGGAAGACTTTAAACATGCTCATCAACAGGTATGTGCAAGTGTGTCCTCTGAATCCATAAATATGACCGAGCTTTCGCAATGGAATGATCTATACGGTGAAGGTGGTTCAAGAGTAAAGAAAGCACTTAGTTACTTCATGTGA 3189 0.4296 MVTVVSGNDQREGNAVAVLESTGSKGSVLVNGTLVKKSTSCVLNSGDEVVFGLLGNHAYVFQQLHPETAVKGAEVQSGGGKLLQIEKRTGDPSAVAGASILASLSSFRQDLTRWKSPSQSASKPHQGTDVSESELDGMEGNSTPNEGTDKATDTGASDKNSPMDCEPDDAVTEAGNVKISGVNDFLRPFFRVLAGSSCKLKLSKSICKQVLEERNGARDTQAASSSGTSVRCAVFKEDLHAAILDGKNLDVSFDNFPYYLSENTKNVLVAACFIHLKNKEHVKYTTDFTTINPRVLLSGPAGSEIYQEMLAKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKEGSNAEKSCICTKQSPTATDGARSMDPSTSEPDTPSSSNAPTFGVESQPKMEIDSAPSTSGASKSGTFKLGDRVKYSFSSSGSLYQTSSRYRGPSNGSRGKVVLLFDDNPLSKIGVRFDKPITDGVDLGGACEAGQGFFCNASDLRLENTIVEELDKLLINTLFEVVNSESRSTPFILFMKDAEKSIVVNGDPYYFKSKLEKLPDNVVVIGAHTHTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNKTLTKLFPNKVTIHMPQDEALLASWKQQLDRDVETLKIKGNLHQLRSVLSRCGMECEGLETVCIKDQTLTNENAEKIVGWALSHHLMQNSEADPDAKLVLSCESIQYGIGILQSIQNESKSLKKSLKDIVTENEFEKRLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSSDIDFDAIANMTEGYSGSDLKNLCVTAAHRPIKEILEKEKKEHAAALAEGRPAPALSGSSDIRSLNMEDFKHAHQQVCASVSSESINMTELSQWNDLYGEGGSRVKKALSYFM 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03881 1062 Gene3D - 756 1037 IPR027417 -
Arst8g03881 1062 MobiDBLite consensus disorder prediction 357 409 - -
Arst8g03881 1062 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 756 932 - -
Arst8g03881 1062 CDD RecA-like_ATAD1 761 927 - -
Arst8g03881 1062 ProSitePatterns AAA-protein family signature. 901 920 IPR003960 GO:0005524|GO:0016887
Arst8g03881 1062 SMART AAA_5 794 931 IPR003593 GO:0016887
Arst8g03881 1062 MobiDBLite consensus disorder prediction 395 409 - -
Arst8g03881 1062 MobiDBLite consensus disorder prediction 135 159 - -
Arst8g03881 1062 SUPERFAMILY SMAD/FHA domain 13 57 IPR008984 GO:0005515
Arst8g03881 1062 Gene3D - 3 70 - -
Arst8g03881 1062 Gene3D - 930 1024 - -
Arst8g03881 1062 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 235 1061 - -
Arst8g03881 1062 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 757 1038 IPR027417 -
Arst8g03881 1062 MobiDBLite consensus disorder prediction 357 388 - -
Arst8g03881 1062 MobiDBLite consensus disorder prediction 113 170 - -
Arst8g03881 1062 Coils Coil 718 738 - -
Arst8g03881 1062 MobiDBLite consensus disorder prediction 113 128 - -
Arst8g03881 1062 Pfam AAA+ lid domain 951 989 IPR041569 -
Arst8g03881 1062 Pfam ATPase family associated with various cellular activities (AAA) 798 927 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03881 Arst-Chr8 49181753 49190506 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03881 793 999 Calmodulin-binding Proteins AT3G56690 36.190 1.01e-30 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03881 - - gmx:100780098 1781.53