Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03880 ATGGTTTCAACGAGACGCAACAGTGGATCTCTCTCCGCAAAACGACCTTCTTCTTCTTCCGACGACAAACCTCCTTCTCCTTCTTCTAAACGCCAAAAGGGTGACAGTGGTGGTAGTGGTGGTGCGTCGGAGAAACCGGTGACGGCGGCGGAGGATTCCAAGGAATTGCGTGCTCCAGAGGCCGCCGCCGATCCCGGAGAATGCGGCACTGCTAATGACGCTCAGATCGCCGGCAACGATGGCAAAGCTGATGCCCCACCAGCCGTACCAGTGGCAGCGCCGATCGCCGATGGGTCTACGCCAAGTTTGGTGGCTGATAAACCAAAGAGTTCGTTCTCTTCGTGGTTTTATCAGAAGCAAAATCCCAACTCTGAGGGTGTTCCCTGGTGCAGGCTCTTATCCCAGTCTTCACAGAATCCGAATGTTCCTATTTCCACATCGAACTTCACAATTGGTTCTAGTAGAAATTCCAACTTCCCGCTGAAGGATCATACTGCAAGTGGAACTTTGTGCAAGATCAAGCAATCCCAGCGTGAGGGGAATGCTGTAGCTGTGCTTGAAAGTACTGGCAGCAAAGGATCTGTGCTAGTAAATGGAACGCTCGTCAAGAAGAGTACCAGCTGTGTGCTTAACTCGGGTGATGAGGTGGTTTTTGGTTTGCTGGGAAATCATGCTTATGTTTTTCAGCAACTGCATCCTGAAACCGCAGTTAAGGGTGCAGAAGTTCAGAGTGGTGGTGGGAAGTTACTGCAGATTGAAAAGAGAACAGGTGACCCTTCAGCCGTAGCTGGGGCTTCTATTTTGGCTTCTTTGTCTAGCTTTAGGCAGGATCTTACAAGATGGAAGTCTCCATCTCAGTCTGCCAGTAAGCCTCACCAGGGTACTGACGTTTCAGAGAGTGAGCTTGATGGCATGGAAGGCAACTCAACTCCAAATGAAGGGACTGACAAAGCCACTGATACTGGAGCAAGCGACAAGAATTCTCCTATGGATTGCGAACCAGATGATGCAGTCACAGAGGCAGGCAATGTGTTGGAAGAAAGAAACGGGGCGAGGGATACACAAGCTGCATCATCTTCGGGTACATCTGTGCGCTGTGCAGTTTTTAAAGAAGATCTTCATGCTGCAATACTGGACGGGAAAAACCTAGATGTGTCCTTTGACAACTTCCCATATTATTTGAGTGAGAATACAAAAAATGTCTTGGTTGCAGCTTGCTTTATACACCTGAAAAATAAGGAACATGTAAAGTACACAACAGATTTTACAACCATAAACCCCCGAGTTCTGCTCTCAGGACCTGCAGGATCAGAAATATATCAGGAAATGTTGGCAAAAGCACTTGCAAAATATTTTGGAGCTAAATTGCTTATATTTGATAGCCATTTACTTCTGGGTGGTTTATCTTCTAAGGAAGCCGAGTTGCTCAAAGAGGGATCCAATGCTGAGAAATCATGCATCTGCACTAAACAAAGTCCTACAGCTACAGACGGGGCTCGTAGTATGGATCCATCAACTAGTGAACCTGATACGCCTAGCTCCTCAAATGCACCTACATTTGGCGTTGAGTCTCAACCTAAGATGGAAATTGATAGCGCACCTTCTACCTCCGGAGCCTCTAAGAGTGGTACATTTAAGCTGGGGGATCGGGTAAAATATAGCTTTTCATCTTCTGGTAGCCTTTATCAGACATCTTCAAGGTACAGGGGGCCATCTAATGGAAGTCGGGGGAAGGTTGTCTTACTTTTTGATGATAATCCCTTGTCAAAAATTGGTGTAAGATTTGATAAACCCATAACTGATGGAGTTGATCTTGGAGGTGCCTGTGAGGCTGGTCAAGGATTTTTCTGCAACGCAAGTGATCTTCGTTTGGAAAACACTATTGTTGAAGAACTGGACAAATTACTTATTAATACATTGTTTGAGGTTGTGAATAGTGAGAGCCGAAGTACGCCTTTCATTTTGTTCATGAAAGACGCAGAGAAGTCTATAGTAGTTAACGGGGATCCATATTACTTTAAAAGTAAGCTTGAAAAGCTTCCTGACAACGTGGTCGTAATAGGTGCACACACGCACACTGACAGCCGAAAGGAGAAGTCACATCCTGGAGGTTTGCTTTTTACAAAGTTTGGGAGCAATCAGACTGCGCTACTTGACTTGGCTTTCCCTGATAGTTTTGGAAGATTACATGACAGAGGCAAAGAAGTACCTAAACCAAACAAAACTTTGACTAAGCTTTTCCCAAATAAAGTTACAATTCATATGCCACAGGATGAGGCACTTCTAGCATCTTGGAAGCAGCAACTTGATCGAGACGTTGAGACTCTCAAAATCAAAGGAAATTTGCATCAATTGCGCTCTGTTTTGAGCCGTTGTGGGATGGAGTGTGAAGGACTTGAGACCGTGTGCATTAAGGATCAGACACTTACAAATGAAAATGCAGAAAAGATAGTTGGTTGGGCTTTGAGCCATCACCTCATGCAGAATTCTGAAGCTGATCCTGATGCAAAGCTTGTTCTATCTTGTGAGAGCATCCAGTATGGTATTGGGATCTTACAGTCTATCCAAAATGAGTCAAAGAGCCTAAAGAAGTCTCTTAAGGACATTGTAACAGAAAATGAGTTTGAAAAGAGGCTTTTAGCTGATGTTATTCCACCTAGTGACATTGGTGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGATACGCTGAAGGAGTTAGTGATGCTTCCTTTACAAAGGCCTGAGCTCTTTTGCAAGGGGCAATTAACCAAGCCGTGCAAGGGCATCTTATTATTTGGGCCCCCTGGAACAGGTAAGACAATGCTTGCAAAGGCAGTTGCTACTGAAGCTGGTGCAAACTTCATCAACATTTCCATGTCAAGCATCACATCCAAGTGGTTTGGTGAGGGTGAGAAATATGTAAAAGCTGTTTTCTCCCTGGCAAGTAAAATTGCACCTAGTGTTATATTTGTTGATGAGGTTGATAGCATGTTGGGCCGAAGGGAAAATCCTGGGGAGCACGAGGCCATGCGAAAAATGAAAAATGAATTTATGGTGAACTGGGATGGCTTACGTACAAAGGATACCGAGCGAGTTCTTGTGCTTGCAGCCACTAATAGGCCTTTTGACCTTGATGAGGCTGTCATAAGGAGGCTGCCACGAAGATTAATGGTAAATTTGCCAGATGCTCCTAATAGAGCAAAGATATTGAAAGTTATTTTGGCAAAAGAGGACTTGTCTTCCGATATTGATTTTGATGCAATCGCAAATATGACCGAGGGGTATTCTGGAAGTGATCTTAAGAATTTGTGTGTAACTGCTGCGCACCGTCCGATTAAAGAGATATTAGAAAAGGAGAAAAAGGAGCATGCTGCTGCTCTGGCAGAGGGTAGACCTGCTCCAGCATTAAGTGGAAGTTCCGATATCAGGTCACTAAACATGGAAGACTTTAAACATGCTCATCAACAGGTATGTGCAAGTGTGTCCTCTGAATCCATAAATATGACCGAGCTTTCGCAATGGAATGATCTATACGGTGAAGGTGGTTCAAGAGTAAAGAAAGCACTTAGTTACTTCATGTGA 3591 0.4444 MVSTRRNSGSLSAKRPSSSSDDKPPSPSSKRQKGDSGGSGGASEKPVTAAEDSKELRAPEAAADPGECGTANDAQIAGNDGKADAPPAVPVAAPIADGSTPSLVADKPKSSFSSWFYQKQNPNSEGVPWCRLLSQSSQNPNVPISTSNFTIGSSRNSNFPLKDHTASGTLCKIKQSQREGNAVAVLESTGSKGSVLVNGTLVKKSTSCVLNSGDEVVFGLLGNHAYVFQQLHPETAVKGAEVQSGGGKLLQIEKRTGDPSAVAGASILASLSSFRQDLTRWKSPSQSASKPHQGTDVSESELDGMEGNSTPNEGTDKATDTGASDKNSPMDCEPDDAVTEAGNVLEERNGARDTQAASSSGTSVRCAVFKEDLHAAILDGKNLDVSFDNFPYYLSENTKNVLVAACFIHLKNKEHVKYTTDFTTINPRVLLSGPAGSEIYQEMLAKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKEGSNAEKSCICTKQSPTATDGARSMDPSTSEPDTPSSSNAPTFGVESQPKMEIDSAPSTSGASKSGTFKLGDRVKYSFSSSGSLYQTSSRYRGPSNGSRGKVVLLFDDNPLSKIGVRFDKPITDGVDLGGACEAGQGFFCNASDLRLENTIVEELDKLLINTLFEVVNSESRSTPFILFMKDAEKSIVVNGDPYYFKSKLEKLPDNVVVIGAHTHTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNKTLTKLFPNKVTIHMPQDEALLASWKQQLDRDVETLKIKGNLHQLRSVLSRCGMECEGLETVCIKDQTLTNENAEKIVGWALSHHLMQNSEADPDAKLVLSCESIQYGIGILQSIQNESKSLKKSLKDIVTENEFEKRLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSSDIDFDAIANMTEGYSGSDLKNLCVTAAHRPIKEILEKEKKEHAAALAEGRPAPALSGSSDIRSLNMEDFKHAHQQVCASVSSESINMTELSQWNDLYGEGGSRVKKALSYFM 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03880 1196 SMART AAA_5 928 1065 IPR003593 GO:0016887
Arst8g03880 1196 Gene3D - 128 237 - -
Arst8g03880 1196 MobiDBLite consensus disorder prediction 280 295 - -
Arst8g03880 1196 ProSitePatterns AAA-protein family signature. 1035 1054 IPR003960 GO:0005524|GO:0016887
Arst8g03880 1196 MobiDBLite consensus disorder prediction 280 337 - -
Arst8g03880 1196 Coils Coil 852 872 - -
Arst8g03880 1196 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 890 1066 - -
Arst8g03880 1196 MobiDBLite consensus disorder prediction 491 522 - -
Arst8g03880 1196 Pfam FHA domain 150 219 IPR000253 GO:0005515
Arst8g03880 1196 MobiDBLite consensus disorder prediction 1 36 - -
Arst8g03880 1196 Pfam ATPase family associated with various cellular activities (AAA) 932 1061 IPR003959 GO:0005524|GO:0016887
Arst8g03880 1196 Gene3D - 890 1171 IPR027417 -
Arst8g03880 1196 MobiDBLite consensus disorder prediction 1 102 - -
Arst8g03880 1196 MobiDBLite consensus disorder prediction 302 326 - -
Arst8g03880 1196 CDD FHA 131 229 - -
Arst8g03880 1196 Gene3D - 1064 1158 - -
Arst8g03880 1196 Pfam AAA+ lid domain 1085 1123 IPR041569 -
Arst8g03880 1196 MobiDBLite consensus disorder prediction 491 543 - -
Arst8g03880 1196 MobiDBLite consensus disorder prediction 529 543 - -
Arst8g03880 1196 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 891 1172 IPR027417 -
Arst8g03880 1196 CDD RecA-like_ATAD1 895 1061 - -
Arst8g03880 1196 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 369 1195 - -
Arst8g03880 1196 SUPERFAMILY SMAD/FHA domain 128 227 IPR008984 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03880 Arst-Chr8 49180810 49190506 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03880 891 1140 Calmodulin-binding Proteins AT3G56690 40.467 2.39e-42 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03880 - - gmx:100780098 1884.77