Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03878 ATGGTTTCAACGAGACGCAACAGTGGATCTCTCTCCGCAAAACGACCTTCTTCTTCTTCCGACGACAAACCTCCTTCTCCTTCTTCTAAACGCCAAAAGGGTGACAGTGGTGGTAGTGGTGGTGCGTCGGAGAAACCGGTGACGGCGGCGGAGGATTCCAAGGAATTGCGTGCTCCAGAGGCCGCCGCCGATCCCGGAGAATGCGGCACTGCTAATGACGCTCAGATCGCCGGCAACGATGGCAAAGCTGATGCCCCACCAGCCGTACCAGTGGCAGCGCCGATCGCCGATGGGTCTACGCCAAGTTTGGTGGCTGATAAACCAAAGAGTTCGTTCTCTTCGTGGTTTTATCAGAAGCAAAATCCCAACTCTGAGGGTGTTCCCTGGTGCAGGCTCTTATCCCAGTCTTCACAGAATCCGAATGTTCCTATTTCCACATCGAACTTCACAATTGGTTCTAGTAGAAATTCCAACTTCCCGCTGAAGGATCATACTGCAAGTGGAACTTTGTGCAAGATCAAGCAATCCCAGCGTGAGGGGAATGCTGTAGCTGTGCTTGAAAGTACTGGCAGCAAAGGATCTGTGCTAGTAAATGGAACGCTCGTCAAGAAGAGTACCAGCTGTGTGCTTAACTCGGGTGATGAGGTGGTTTTTGGTTTGCTGGGAAATCATGCTTATGTTTTTCAGCAACTGCATCCTGAAACCGCAGTTAAGGGTGCAGAAGTTCAGAGTGGTGGTGGGAAGTTACTGCAGATTGAAAAGAGAACAGAGAGTGAGCTTGATGGCATGGAAGGCAACTCAACTCCAAATGAAGGGACTGACAAAGCCACTGATACTGGAGCAAGCGACAAGAATTCTCCTATGGATTGCGAACCAGATGATGCAGTCACAGAGGCAGGCAATGTAAAAATCTCTGGGGTGAATGATTTCCTAAGGCCTTTCTTCCGGGTCCTTGCCGGATCTAGTTGTAAACTGAAATTGAGCAAAAGTATCTGTAAACAGGTGTTGGAAGAAAGAAACGGGGCGAGGGATACACAAGCTGCATCATCTTCGGGTACATCTGTGCGCTGTGCAGTTTTTAAAGAAGATCTTCATGCTGCAATACTGGACGGGAAAAACCTAGATGTGTCCTTTGACAACTTCCCATATTATTTGAGTGAGAATACAAAAAATGTCTTGGTTGCAGCTTGCTTTATACACCTGAAAAATAAGGAACATGTAAAGTACACAACAGATTTTACAACCATAAACCCCCGAGTTCTGCTCTCAGGACCTGCAGGATCAGAAATATATCAGGAAATGTTGGCAAAAGCACTTGCAAAATATTTTGGAGCTAAATTGCTTATATTTGATAGCCATTTACTTCTGGGTGGTTTATCTTCTAAGGAAGCCGAGTTGCTCAAAGAGGGATCCAATGCTGAGAAATCATGCATCTGCACTAAACAAAGTCCTACAGCTACAGACGGGGCTCGTAGTATGGATCCATCAACTAGTGAACCTGATACGCCTAGCTCCTCAAATGCACCTACATTTGGCGTTGAGTCTCAACCTAAGATGGAAATTGATAGCGCACCTTCTACCTCCGGAGCCTCTAAGAGTGGTACATTTAAGCTGGGGGATCGGGTAAAATATAGCTTTTCATCTTCTGGTAGCCTTTATCAGACATCTTCAAGGTACAGGGGGCCATCTAATGGAAGTCGGGGGAAGGTTGTCTTACTTTTTGATGATAATCCCTTGTCAAAAATTGGTGTAAGATTTGATAAACCCATAACTGATGGAGTTGATCTTGGAGGTGCCTGTGAGGCTGGTCAAGGATTTTTCTGCAACGCAAGTGATCTTCGTTTGGAAAACACTATTGTTGAAGAACTGGACAAATTACTTATTAATACATTGTTTGAGGTTGTGAATAGTGAGAGCCGAAGTACGCCTTTCATTTTGTTCATGAAAGACGCAGAGAAGTCTATAGTAGTTAACGGGGATCCATATTACTTTAAAAGTAAGCTTGAAAAGCTTCCTGACAACGTGGTCGTAATAGGTGCACACACGCACACTGACAGCCGAAAGGAGAAGTCACATCCTGGAGGTTTGCTTTTTACAAAGTTTGGGAGCAATCAGACTGCGCTACTTGACTTGGCTTTCCCTGATAGTTTTGGAAGATTACATGACAGAGGCAAAGAAGTACCTAAACCAAACAAAACTTTGACTAAGCTTTTCCCAAATAAAGTTACAATTCATATGCCACAGGATGAGGCACTTCTAGCATCTTGGAAGCAGCAACTTGATCGAGACGTTGAGACTCTCAAAATCAAAGGAAATTTGCATCAATTGCGCTCTGTTTTGAGCCGTTGTGGGATGGAGTGTGAAGGACTTGAGACCGTGTGCATTAAGGATCAGACACTTACAAATGAAAATGCAGAAAAGATAGTTGGTTGGGCTTTGAGCCATCACCTCATGCAGAATTCTGAAGCTGATCCTGATGCAAAGCTTGTTCTATCTTGTGAGAGCATCCAGTATGGTATTGGGATCTTACAGTCTATCCAAAATGAGTCAAAGAGCCTAAAGAAGTCTCTTAAGGACATTGTAACAGAAAATGAGTTTGAAAAGAGGCTTTTAGCTGATGTTATTCCACCTAGTGACATTGGTGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGATACGCTGAAGGAGTTAGTGATGCTTCCTTTACAAAGGCCTGAGCTCTTTTGCAAGGGGCAATTAACCAAGCCGTGCAAGGGCATCTTATTATTTGGGCCCCCTGGAACAGGTAAGACAATGCTTGCAAAGGCAGTTGCTACTGAAGCTGGTGCAAACTTCATCAACATTTCCATGTCAAGCATCACATCCAAGTGGTTTGGTGAGGGTGAGAAATATGTAAAAGCTGTTTTCTCCCTGGCAAGTAAAATTGCACCTAGTGTTATATTTGTTGATGAGGTTGATAGCATGTTGGGCCGAAGGGAAAATCCTGGGGAGCACGAGGCCATGCGAAAAATGAAAAATGAATTTATGGTGAACTGGGATGGCTTACGTACAAAGGATACCGAGCGAGTTCTTGTGCTTGCAGCCACTAATAGGCCTTTTGACCTTGATGAGGCTGTCATAAGGAGGCTGCCACGAAGATTAATGGTAAATTTGCCAGATGCTCCTAATAGAGCAAAGATATTGAAAGTTATTTTGGCAAAAGAGGACTTGTCTTCCGATATTGATTTTGATGCAATCGCAAATATGACCGAGGGGTATTCTGGAAGTGATCTTAAGAATTTGTGTGTAACTGCTGCGCACCGTCCGATTAAAGAGATATTAGAAAAGGAGAAAAAGGAGCATGCTGCTGCTCTGGCAGAGGGTAGACCTGCTCCAGCATTAAGTGGAAGTTCCGATATCAGGTCACTAAACATGGAAGACTTTAAACATGCTCATCAACAGGTATGTGCAAGTGTGTCCTCTGAATCCATAAATATGACCGAGCTTTCGCAATGGAATGATCTATACGGTGAAGGTGGTTCAAGAGTAAAGAAAGCACTTAGTTACTTCATGTGA 3564 0.4416 MVSTRRNSGSLSAKRPSSSSDDKPPSPSSKRQKGDSGGSGGASEKPVTAAEDSKELRAPEAAADPGECGTANDAQIAGNDGKADAPPAVPVAAPIADGSTPSLVADKPKSSFSSWFYQKQNPNSEGVPWCRLLSQSSQNPNVPISTSNFTIGSSRNSNFPLKDHTASGTLCKIKQSQREGNAVAVLESTGSKGSVLVNGTLVKKSTSCVLNSGDEVVFGLLGNHAYVFQQLHPETAVKGAEVQSGGGKLLQIEKRTESELDGMEGNSTPNEGTDKATDTGASDKNSPMDCEPDDAVTEAGNVKISGVNDFLRPFFRVLAGSSCKLKLSKSICKQVLEERNGARDTQAASSSGTSVRCAVFKEDLHAAILDGKNLDVSFDNFPYYLSENTKNVLVAACFIHLKNKEHVKYTTDFTTINPRVLLSGPAGSEIYQEMLAKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKEGSNAEKSCICTKQSPTATDGARSMDPSTSEPDTPSSSNAPTFGVESQPKMEIDSAPSTSGASKSGTFKLGDRVKYSFSSSGSLYQTSSRYRGPSNGSRGKVVLLFDDNPLSKIGVRFDKPITDGVDLGGACEAGQGFFCNASDLRLENTIVEELDKLLINTLFEVVNSESRSTPFILFMKDAEKSIVVNGDPYYFKSKLEKLPDNVVVIGAHTHTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNKTLTKLFPNKVTIHMPQDEALLASWKQQLDRDVETLKIKGNLHQLRSVLSRCGMECEGLETVCIKDQTLTNENAEKIVGWALSHHLMQNSEADPDAKLVLSCESIQYGIGILQSIQNESKSLKKSLKDIVTENEFEKRLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSSDIDFDAIANMTEGYSGSDLKNLCVTAAHRPIKEILEKEKKEHAAALAEGRPAPALSGSSDIRSLNMEDFKHAHQQVCASVSSESINMTELSQWNDLYGEGGSRVKKALSYFM 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03878 1187 Gene3D - 881 1162 IPR027417 -
Arst8g03878 1187 MobiDBLite consensus disorder prediction 520 534 - -
Arst8g03878 1187 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 881 1057 - -
Arst8g03878 1187 MobiDBLite consensus disorder prediction 482 534 - -
Arst8g03878 1187 CDD RecA-like_ATAD1 886 1052 - -
Arst8g03878 1187 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 360 1186 - -
Arst8g03878 1187 Pfam AAA+ lid domain 1076 1114 IPR041569 -
Arst8g03878 1187 Pfam ATPase family associated with various cellular activities (AAA) 923 1052 IPR003959 GO:0005524|GO:0016887
Arst8g03878 1187 Pfam FHA domain 150 219 IPR000253 GO:0005515
Arst8g03878 1187 SMART AAA_5 919 1056 IPR003593 GO:0016887
Arst8g03878 1187 MobiDBLite consensus disorder prediction 257 293 - -
Arst8g03878 1187 ProSitePatterns AAA-protein family signature. 1026 1045 IPR003960 GO:0005524|GO:0016887
Arst8g03878 1187 Gene3D - 128 237 - -
Arst8g03878 1187 MobiDBLite consensus disorder prediction 262 284 - -
Arst8g03878 1187 Coils Coil 843 863 - -
Arst8g03878 1187 MobiDBLite consensus disorder prediction 1 36 - -
Arst8g03878 1187 MobiDBLite consensus disorder prediction 482 513 - -
Arst8g03878 1187 MobiDBLite consensus disorder prediction 1 102 - -
Arst8g03878 1187 Gene3D - 1055 1149 - -
Arst8g03878 1187 CDD FHA 131 229 - -
Arst8g03878 1187 SUPERFAMILY SMAD/FHA domain 128 227 IPR008984 GO:0005515
Arst8g03878 1187 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 882 1163 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03878 Arst-Chr8 49180809 49190506 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03878 882 1131 Calmodulin-binding Proteins AT3G56690 40.467 2.27e-42 167