Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03877 ATGGTTTCAACGAGACGCAACAGTGGATCTCTCTCCGCAAAACGACCTTCTTCTTCTTCCGACGACAAACCTCCTTCTCCTTCTTCTAAACGCCAAAAGGGTGACAGTGGTGGTAGTGGTGGTGCGTCGGAGAAACCGGTGACGGCGGCGGAGGATTCCAAGGAATTGCGTGCTCCAGAGGCCGCCGCCGATCCCGGAGAATGCGGCACTGCTAATGACGCTCAGATCGCCGGCAACGATGGCAAAGCTGATGCCCCACCAGCCGTACCAGTGGCAGCGCCGATCGCCGATGGGTCTACGCCAAGTTTGGTGGCTGATAAACCAAAGAGTTCGTTCTCTTCGTGGTTTTATCAGAAGCAAAATCCCAACTCTGAGGGTGTTCCCTGGTGCAGGCTCTTATCCCAGTCTTCACAGAATCCGAATGTTCCTATTTCCACATCGAACTTCACAATTGGTTCTAGTAGAAATTCCAACTTCCCGCTGAAGGATCATACTGCAAGTGGAACTTTGTGCAAGATCAAGCAATCCCAGCGTGAGGGGAATGCTGTAGCTGTGCTTGAAAGTACTGGCAGCAAAGGATCTGTGCTAGTAAATGGAACGCTCGTCAAGAAGAGTACCAGCTGTGTGCTTAACTCGGGTGATGAGGTGGTTTTTGGTTTGCTGGGAAATCATGCTTATGTTTTTCAGCAACTGCATCCTGAAACCGCAGTTAAGGGTGCAGAAGTTCAGAGTGGTGGTGGGAAGTTACTGCAGATTGAAAAGAGAACAGGTGACCCTTCAGCCGTAGCTGGGGCTTCTATTTTGGCTTCTTTGTCTAGCTTTAGGCAGGATCTTACAAGATGGAAGTCTCCATCTCAGTCTGCCAGTAAGCCTCACCAGGGTACTGACGTTTCAGAGAGTGAGCTTGATGGCATGGAAGGCAACTCAACTCCAAATGAAGGGACTGACAAAGCCACTGATACTGGAGCAAGCGACAAGAATTCTCCTATGGATTGCGAACCAGATGATGCAGTCACAGAGGCAGGCAATGTAAAAATCTCTGGGGTGAATGATTTCCTAAGGCCTTTCTTCCGGGTCCTTGCCGGATCTAGTTGTAAACTGAAATTGAGCAAAAGTATCTGTAAACAGGTGTTGGAAGAAAGAAACGGGGCGAGGGATACACAAGCTGCATCATCTTCGGGTACATCTGTGCGCTGTGCAGTTTTTAAAGAAGATCTTCATGCTGCAATACTGGACGGGAAAAACCTAGATGTGTCCTTTGACAACTTCCCATATTATTTGAGTGAGAATACAAAAAATGTCTTGGTTGCAGCTTGCTTTATACACCTGAAAAATAAGGAACATGTAAAGTACACAACAGATTTTACAACCATAAACCCCCGAGTTCTGCTCTCAGGACCTGCAGGATCAGAAATATATCAGGAAATGTTGGCAAAAGCACTTGCAAAATATTTTGGAGCTAAATTGCTTATATTTGATAGCCATTTACTTCTGGGTGGTTTATCTTCTAAGGAAGCCGAGTTGCTCAAAGAGGGATCCAATGCTGAGAAATCATGCATCTGCACTAAACAAAGTCCTACAGCTACAGACGGGGCTCGTAGTATGGATCCATCAACTAGTGAACCTGATACGCCTAGCTCCTCAAATGCACCTACATTTGGCGTTGAGTCTCAACCTAAGATGGAAATTGATAGCGCACCTTCTACCTCCGGAGCCTCTAAGAGTGGTACATTTAAGCTGGGGGATCGGGTAAAATATAGCTTTTCATCTTCTGGTAGCCTTTATCAGACATCTTCAAGGTACAGGGGGCCATCTAATGGAAGTCGGGGGAAGGTTGTCTTACTTTTTGATGATAATCCCTTGTCAAAAATTGGTGTAAGATTTGATAAACCCATAACTGATGGAGTTGATCTTGGAGGTGCCTGTGAGGCTGGTCAAGGATTTTTCTGCAACGCAAGTGATCTTCGTTTGGAAAACACTATTGTTGAAGAACTGGACAAATTACTTATTAATACATTGTTTGAGGTTGTGAATAGTGAGAGCCGAAGTACGCCTTTCATTTTGTTCATGAAAGACGCAGAGAAGTCTATAGTAGTTAACGGGGATCCATATTACTTTAAAAGTAAGCTTGAAAAGCTTCCTGACAACGTGGTCGTAATAGGTGCACACACGCACACTGACAGCCGAAAGGAGAAGTCACATCCTGGAGGTTTGCTTTTTACAAAGTTTGGGAGCAATCAGACTGCGCTACTTGACTTGGCTTTCCCTGATAGTTTTGGAAGATTACATGACAGAGGCAAAGAAGTACCTAAACCAAACAAAACTTTGACTAAGCTTTTCCCAAATAAAGTTACAATTCATATGCCACAGGATGAGGCACTTCTAGCATCTTGGAAGCAGCAACTTGATCGAGACGTTGAGACTCTCAAAATCAAAGGAAATTTGCATCAATTGCGCTCTGTTTTGAGCCGTTGTGGGATGGAGTGTGAAGGACTTGAGACCGTGTGCATTAAGGATCAGACACTTACAAATGAAAATGCAGAAAAGATAGTTGGTTGGGCTTTGAGCCATCACCTCATGCAGAATTCTGAAGCTGATCCTGATGCAAAGCTTGTTCTATCTTGTGAGAGCATCCAGTATGGTATTGGGATCTTACAGTCTATCCAAAATGAGTCAAAGAGCCTAAAGAAGTCTCTTAAGGACATTGTAACAGAAAATGAGTTTGAAAAGAGGCTTTTAGCTGATGTTATTCCACCTAGTGACATTGGTGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGATACGCTGAAGGAGTTAGTGATGCTTCCTTTACAAAGGCCTGAGCTCTTTTGCAAGGGGCAATTAACCAAGCCGTGCAAGGGCATCTTATTATTTGGGCCCCCTGGAACAGGTAAGACAATGCTTGCAAAGGCAGTTGCTACTGAAGCTGGTGCAAACTTCATCAACATTTCCATGTCAAGCATCACATCCAAGTGGTTTGGTGAGGGTGAGAAATATGTAAAAGCTGTTTTCTCCCTGGCAAGTAAAATTGCACCTAGTGTTATATTTGTTGATGAGGTTGATAGCATGTTGGGCCGAAGGGAAAATCCTGGGGAGCACGAGGCCATGCGAAAAATGAAAAATGAATTTATGGTGAACTGGGATGGCTTACGTACAAAGGATACCGAGCGAGTTCTTGTGCTTGCAGCCACTAATAGGCCTTTTGACCTTGATGAGGCTGTCATAAGGAGGCTGCCACGAAGATTAATGGTAAATTTGCCAGATGCTCCTAATAGAGCAAAGATATTGAAAGTTATTTTGGCAAAAGAGGACTTGTCTTCCGATATTGATTTTGATGCAATCGCAAATATGACCGAGGGGTATTCTGGAAGTGATCTTAAGAATTTGTGTGTAACTGCTGCGCACCGTCCGATTAAAGAGATATTAGAAAAGGAGAAAAAGGAGCATGCTGCTGCTCTGGCAGAGGGTAGACCTGCTCCAGCATTAAGTGGAAGTTCCGATATCAGGTCACTAAACATGGAAGACTTTAAACATGCTCATCAACAGGTATGTGCAAGTGTGTCCTCTGAATCCATAAATATGACCGAGCTTTCGCAATGGAATGATCTATACGGTGAAGGTGGTTCAAGAGTAAAGAAAGCACTTAGTTACTTCATGTGA 3690 0.4436 MVSTRRNSGSLSAKRPSSSSDDKPPSPSSKRQKGDSGGSGGASEKPVTAAEDSKELRAPEAAADPGECGTANDAQIAGNDGKADAPPAVPVAAPIADGSTPSLVADKPKSSFSSWFYQKQNPNSEGVPWCRLLSQSSQNPNVPISTSNFTIGSSRNSNFPLKDHTASGTLCKIKQSQREGNAVAVLESTGSKGSVLVNGTLVKKSTSCVLNSGDEVVFGLLGNHAYVFQQLHPETAVKGAEVQSGGGKLLQIEKRTGDPSAVAGASILASLSSFRQDLTRWKSPSQSASKPHQGTDVSESELDGMEGNSTPNEGTDKATDTGASDKNSPMDCEPDDAVTEAGNVKISGVNDFLRPFFRVLAGSSCKLKLSKSICKQVLEERNGARDTQAASSSGTSVRCAVFKEDLHAAILDGKNLDVSFDNFPYYLSENTKNVLVAACFIHLKNKEHVKYTTDFTTINPRVLLSGPAGSEIYQEMLAKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKEGSNAEKSCICTKQSPTATDGARSMDPSTSEPDTPSSSNAPTFGVESQPKMEIDSAPSTSGASKSGTFKLGDRVKYSFSSSGSLYQTSSRYRGPSNGSRGKVVLLFDDNPLSKIGVRFDKPITDGVDLGGACEAGQGFFCNASDLRLENTIVEELDKLLINTLFEVVNSESRSTPFILFMKDAEKSIVVNGDPYYFKSKLEKLPDNVVVIGAHTHTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNKTLTKLFPNKVTIHMPQDEALLASWKQQLDRDVETLKIKGNLHQLRSVLSRCGMECEGLETVCIKDQTLTNENAEKIVGWALSHHLMQNSEADPDAKLVLSCESIQYGIGILQSIQNESKSLKKSLKDIVTENEFEKRLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSSDIDFDAIANMTEGYSGSDLKNLCVTAAHRPIKEILEKEKKEHAAALAEGRPAPALSGSSDIRSLNMEDFKHAHQQVCASVSSESINMTELSQWNDLYGEGGSRVKKALSYFM 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03877 1229 Coils Coil 885 905 - -
Arst8g03877 1229 Gene3D - 1097 1191 - -
Arst8g03877 1229 MobiDBLite consensus disorder prediction 280 295 - -
Arst8g03877 1229 Gene3D - 128 237 - -
Arst8g03877 1229 MobiDBLite consensus disorder prediction 524 555 - -
Arst8g03877 1229 Pfam AAA+ lid domain 1118 1156 IPR041569 -
Arst8g03877 1229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 924 1205 IPR027417 -
Arst8g03877 1229 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 402 1228 - -
Arst8g03877 1229 SUPERFAMILY SMAD/FHA domain 128 227 IPR008984 GO:0005515
Arst8g03877 1229 CDD RecA-like_ATAD1 928 1094 - -
Arst8g03877 1229 MobiDBLite consensus disorder prediction 524 576 - -
Arst8g03877 1229 MobiDBLite consensus disorder prediction 562 576 - -
Arst8g03877 1229 Pfam FHA domain 150 219 IPR000253 GO:0005515
Arst8g03877 1229 MobiDBLite consensus disorder prediction 1 36 - -
Arst8g03877 1229 MobiDBLite consensus disorder prediction 1 102 - -
Arst8g03877 1229 Pfam ATPase family associated with various cellular activities (AAA) 965 1094 IPR003959 GO:0005524|GO:0016887
Arst8g03877 1229 ProSitePatterns AAA-protein family signature. 1068 1087 IPR003960 GO:0005524|GO:0016887
Arst8g03877 1229 SMART AAA_5 961 1098 IPR003593 GO:0016887
Arst8g03877 1229 MobiDBLite consensus disorder prediction 302 326 - -
Arst8g03877 1229 MobiDBLite consensus disorder prediction 280 336 - -
Arst8g03877 1229 CDD FHA 131 229 - -
Arst8g03877 1229 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 923 1099 - -
Arst8g03877 1229 Gene3D - 923 1204 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03877 Arst-Chr8 49180809 49190506 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03877 924 1173 Calmodulin-binding Proteins AT3G56690 40.467 3.06e-42 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03877 - - gmx:100780098 1957.18