Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03862 ATGGAGAACACCACCAACACCAACAACACCCACCCTCACCAGCAGGCCCAATCGAGCCCATACCCAGGCCCACCAACACTCCCACCACCTCCCACCACCACCACCGTCGTCCCCGGAGGCGCACCACCACCGTCCTCCGCCGCACCATTCCACCACCTCCTCCAGCAACAACAGCAACAGCTTCAGATGTTCTGGTCCTACCAGCGCCAAGAAATCGAACACGTCAACGACTTCAAGAACCACCAGCTTCCATTGGCGCGCATCAAGAAGATCATGAAGGCCGACGAAGACGTTCGCATGATCTCCGCCGAAGCCCCAATCCTCTTCGCCAAAGCCTGCGAGCTCTTCATCCTCGAGCTCACGATCCGTTCATGGCTTCACGCCGAAGAGAACAAGCGAAGGACACTTCAGAAGAACGACATCGCCGCCGCCATTACGCGAACCGACATCTTCGATTTCTTAGTTGATATTGTTCCCAGGGACGATATCAAGGACGATGCGGCGGCTCTCGGCGGTATTGTGGCCGCTGCTGCGGCGGCTACTGCCAGTGGTGTTCCGTACTATTATCCGCCCATGGGCCAGCCCGCAGGCCCGCCTGGTGGCATGATGATTGGCAGGCCCGCAGTGGACCCGGCAACGGGGGTTTACGTGCAGCCGCCGTCGCAGGCGTGGCAGAGTGTTTGGCAGACTGCTGCGGAGGATGGCAGCTATGGGAGTGGCGCCACCGCCGCTCAAGGGAATCTTGATGGACAGAGCTGA 759 0.5995 MENTTNTNNTHPHQQAQSSPYPGPPTLPPPPTTTTVVPGGAPPPSSAAPFHHLLQQQQQQLQMFWSYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDDIKDDAAALGGIVAAAAAATASGVPYYYPPMGQPAGPPGGMMIGRPAVDPATGVYVQPPSQAWQSVWQTAAEDGSYGSGATAAQGNLDGQS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03862 252 FunFam Nuclear transcription factor Y subunit gamma 51 160 - -
Arst8g03862 252 MobiDBLite consensus disorder prediction 18 45 - -
Arst8g03862 252 SUPERFAMILY Histone-fold 41 154 IPR009072 GO:0046982
Arst8g03862 252 MobiDBLite consensus disorder prediction 1 17 - -
Arst8g03862 252 MobiDBLite consensus disorder prediction 1 49 - -
Arst8g03862 252 Pfam Core histone H2A/H2B/H3/H4 69 145 IPR007125 GO:0003677
Arst8g03862 252 Gene3D Histone, subunit A 49 160 IPR009072 GO:0046982
Arst8g03862 252 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 47 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03862 Arst-Chr8 49043927 49047736 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03862 47 251 CCAAT-HAP5 Transcription Factor Family AT3G48590 85.096 3.34e-110 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Arst8g03862 CBFD_NFYB_HMF 2.8e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03862 - - pcin:129320575 316.62