Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03861 ATGGGAAACCAAAATAGTACTCAACAACATCAAATAGAGATTGAAAACTTATGGTCTTTTCAACGTCGCGAGGTGGAACAGGCTCACGACTTTAAAAATGGCCTGTTCCCCCTCGCCCGTGTTAGGAAGATGATGAAGGTCGAAGAAGACGTTGACCGGATCTCGGCCGAGGTGCCGGTTGTCTTGGCCAAGGCATGTGATCTCTTCATCCGTAATGTCACCCTCCAATCATGGCACCAAGCTCAGAAAAATAAGCGTTCTATCATCCAACGCCAAGACATCAACTCCACCATGGATTCCTTCAGGGATGCTTGCCATAACATTGAATATTTTAAAAGATTAATGAGCGAAGCTTAG 357 0.4538 MGNQNSTQQHQIEIENLWSFQRREVEQAHDFKNGLFPLARVRKMMKVEEDVDRISAEVPVVLAKACDLFIRNVTLQSWHQAQKNKRSIIQRQDINSTMDSFRDACHNIEYFKRLMSEA 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03861 118 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 36 96 IPR003958 -
Arst8g03861 118 SUPERFAMILY Histone-fold 14 100 IPR009072 GO:0046982
Arst8g03861 118 FunFam Nuclear transcription factor Y subunit C 1 105 - -
Arst8g03861 118 Gene3D Histone, subunit A 1 103 IPR009072 GO:0046982
Arst8g03861 118 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 10 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03861 Arst-Chr8 49038798 49039154 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03861 17 98 CCAAT-HAP5 Transcription Factor Family AT5G63470 51.220 7.48e-28 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Arst8g03861 CBFD_NFYB_HMF 3.2e-15 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03861 - K08066 adu:107463451 229.95