Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03860 ATGGGAAACCAAAATAATACTCAACAACATCAAATAGAGATTGAAAACTTATGGTCCTTTCAACGTCGCGAGGTGGAACAGGCCCACGATTTTAAAAATGGCCTGTTCCCCCTCGCCCGTGTTAGGAAGATGATGAAGGTCGAAGAAGACGTTGACCGGATCTCAGCCGAGGTGCCGGTTGTCTTGGCCAAGGCATGTGATCTCTTCATTCGTAATGTCACCCTCCAATCATGGCACCAAGCTCAGGAAAATAAGCGTTCTATCATCCAACGCCAAGACATCAACTCCACCATGGATTCCTTTAGGGATGCTTACCATAACATTGAATATTTTAAGAGATTAATGAGCGCATCTTAG 357 0.4482 MGNQNNTQQHQIEIENLWSFQRREVEQAHDFKNGLFPLARVRKMMKVEEDVDRISAEVPVVLAKACDLFIRNVTLQSWHQAQENKRSIIQRQDINSTMDSFRDAYHNIEYFKRLMSAS 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03860 118 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 10 99 - -
Arst8g03860 118 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 36 96 IPR003958 -
Arst8g03860 118 FunFam Nuclear transcription factor Y subunit C 1 107 - -
Arst8g03860 118 Gene3D Histone, subunit A 1 106 IPR009072 GO:0046982
Arst8g03860 118 SUPERFAMILY Histone-fold 11 100 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03860 Arst-Chr8 49026544 49026900 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03860 17 98 CCAAT-HAP5 Transcription Factor Family AT5G63470 52.439 1.38e-28 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Arst8g03860 CBFD_NFYB_HMF 3.5e-15 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03860 - K08066 adu:107463451 239.965