Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03831 ATGATGAGCAAGAAGATGAGGTTTGTTAAGAAGAACAAGAATGGAGTGAGATTATTGCCACCTGGATTTAGGTTCCAACCAACAGAAGAGGAGCTTCTATTTCAGTATTTGAAATGCAAGGTTTTCTCTTTTCAGTTGCCAGCTTCAATCATTCCTGAGATCAATGTATGCAACTATGATCCTTGGGATTTGCCAGGGAATAATAATAATTATGGGGAGGAAGAAGAGAGATACTTGTTCAGCTCAAAGGAAGTTAAGTATAGAAACGGTAACCGAATGAACAGAATAACGAAATCTGGATATTGGAAAGCAACTGGATCAGACAAAAGAATAATTTCAACATCATCCAATAATAATAATAATAATAATATTGTTGGGATAAGAAAAACTCTTGTATTCTATCATGGAAAATCTCCAAATGGCTCTAGAACTCATTGGATCATGCGTGAGTATCGACTTGTCACTACTCCTTCTAATTCATCCCAGAAGTATGTAGAAGACTTAGGGAATTGGGTTCTTTGCCGCATATTCAAGAAGAAAAGAAGCATAGAAAGTCAACATCACATGGTCAAGAACAAAATTAATAATAATGTTGTCGAGGTGGCTAATAATAATAATAATAAGCCAATATTCTTTGATTTTATGAGGCTATATGACTCGCCAATATCTTCTTCTTCATCTTCATCTTCTTCTTGTTTAAGTTCTGATTTCATAACTCAAATGTAA 726 0.3444 MMSKKMRFVKKNKNGVRLLPPGFRFQPTEEELLFQYLKCKVFSFQLPASIIPEINVCNYDPWDLPGNNNNYGEEEERYLFSSKEVKYRNGNRMNRITKSGYWKATGSDKRIISTSSNNNNNNNIVGIRKTLVFYHGKSPNGSRTHWIMREYRLVTTPSNSSQKYVEDLGNWVLCRIFKKKRSIESQHHMVKNKINNNVVEVANNNNNKPIFFDFMRLYDSPISSSSSSSSSCLSSDFITQM 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03831 241 ProSiteProfiles NAC domain profile. 19 179 IPR003441 GO:0003677|GO:0006355
Arst8g03831 241 SUPERFAMILY NAC domain 17 179 IPR036093 GO:0003677|GO:0006355
Arst8g03831 241 Gene3D NAC domain 28 184 IPR036093 GO:0003677|GO:0006355
Arst8g03831 241 Pfam No apical meristem (NAM) protein 20 153 IPR003441 GO:0003677|GO:0006355
Arst8g03831 241 MobiDBLite consensus disorder prediction 222 241 - -
Arst8g03831 241 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 19 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03831 Arst-Chr8 48744856 48746796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03831 9 216 NAC Transcription Factor Family AT5G13180 53.394 1.87e-69 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst8g03831 NAM 1.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03831 - - aprc:113868555 279.256