Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03824 ATGAAGATGTTGCAGCGGCTTGTGCCAGGCTGTGATAAGGTGACTGGGAAGGCCCTTATGTTGGATGAAATAATCAATTATGTTCAATCTTTACAGAATCAAGTAGAGTTCTTGTCTTTGAAGCTTGCTTCGGTGAGTCCCATTTTCTATGACATGGCAACAGATCTAGACACTACTCTCTTGGTTAGACCTGAGAAATTAAACATCCAAAATTGCAGCAGCTCTAACATCCAACAAACCACCAAAACCAGCACCCTACCTGCCGCCGTTGCCGCCGCCACCACCGCCACCGTCTTCCCCACCGCTAATGATCACTATCTCTTGGATAGTAATTCAGCTTCAGCTTTTCTTCAAGCCCAGAAATCAAATGTCTTCTCCATGGAGAACGGTAGTCAATTCTGGGACACAGAAGAGCAAAGACAAAAATTTCTTCATCCATATGAATTCATCAACAACAACAACTTATGTTCCTTTCATTAG 480 0.4333 MKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSLKLASVSPIFYDMATDLDTTLLVRPEKLNIQNCSSSNIQQTTKTSTLPAAVAAATTATVFPTANDHYLLDSNSASAFLQAQKSNVFSMENGSQFWDTEEQRQKFLHPYEFINNNNLCSFH 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03824 159 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 31 IPR011598 GO:0046983
Arst8g03824 159 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 98 IPR024097 GO:0006355
Arst8g03824 159 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 2 46 IPR036638 GO:0046983
Arst8g03824 159 Gene3D - 1 46 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03824 Arst-Chr8 48669032 48670895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03824 1 120 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 49.167 3.60e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03824 - - adu:107463602 310.071