Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03790 ATGGACCCTGCTGACGCATTCACAACAAGCCTCTTCAAGTGGGACCCACGCACGGTCCTTCCTCCTCCTCCTTCCTCTGCCACTCGTCCGCCGCCTCAGATCCTTGACTACACGGTTGCTCCCCCTGCTGTCTCCCCTTCTTCGGTGTCCTTCCCGCCACCCAAGAGACTCGACCTAGGAGGCCTCGAAGAGCTTTTACAAGCCTACGGTATACGCTATTACACGGCGGCAAAGATGGCAGAGCTAGGGTTCACGGTGAGGACTCTTATTGACATGAAAGACGATGAGATCGACGATATGATGAATAGCCTCTCTCAGATCTTCCGATGGGACCTTCTCGTCGGTGAGAGGTATGGTGTTAAGGCTGCCGTTAGAGCTGAGCGGCGTCGTCTCGAGGAGGAGGAGCTTATCAAACGCCGTAACTTCCTCTGCACCACTGATACCACCACCAACGCCCTTGACGCTCTTTCTCAAGAAGGTTTATCAGAGGAACCAGTGGTGCAACAAGAGAAAGAGGCTGCTGGAAGCGGGGGAGGGAGTACGTGGGAGGTGGTAGGCGGCGGAGAAGAGAGGAGGAAGCAGGTGCAGCAAGAAAGGAGGAGGAGAAGAAGCAACAAGATAAATAACAAGGGAATTAATAGAAGCAACAACGAGGATGGTGAAGAGGAAGAGTTAGAAGGAGAAGAGAACGACATGATTGAAGGGAGCAACGGCGGCAACGGCGGAGAAAGGCAAAGAGAGCACCCCTTCATAGTGACGGAGCCTGGGGAAGTGGCACGTGGCAAGAAGAATGGATTAGACTACCTTTTTCATCTCTATGAACAATGCCGTGAGTTCTTGATCCAAGTTCAAGCCATTGCTAAGGACCGTGGTGAAAAATGCCCCACCAAGGTAACAAATCAAGTATTCAGGTATGCAAAGAAAGCAGGTGCAAGCTACATTAACAAGCCAAAGATGAGGCACTACGTCCATTGCTATGCCCTACACTGCCTCGACGAGGACGCGTCTAACGAGCTCCGACGAACCTTCAAGGAGAGGGGCGAGAACGTGGGCGCCTGGAGGCAAGCGTGCTACAAGCCTCTAGTTGCGATAGCTGCTCGTCAGGGTTGGGACATTGATGCCATCTTCAATGCTCATCCTCGCCTTTCCATTTGGTATGTTCCTACTAAGCTCCGCCAACTTTGTCATGCTGAGAGTAACAACGTGGTCGCCACCGTAGCAGTCTCTACCTCTGTTTCGCCAGCAGTTGCCCAACTTCCTTTTTAA 1266 0.5245 MDPADAFTTSLFKWDPRTVLPPPPSSATRPPPQILDYTVAPPAVSPSSVSFPPPKRLDLGGLEELLQAYGIRYYTAAKMAELGFTVRTLIDMKDDEIDDMMNSLSQIFRWDLLVGERYGVKAAVRAERRRLEEEELIKRRNFLCTTDTTTNALDALSQEGLSEEPVVQQEKEAAGSGGGSTWEVVGGGEERRKQVQQERRRRRSNKINNKGINRSNNEDGEEEELEGEENDMIEGSNGGNGGERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQAIAKDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEDASNELRRTFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAESNNVVATVAVSTSVSPAVAQLPF 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03790 421 Gene3D Protein LEAFY 240 409 IPR038276 -
Arst8g03790 421 PANTHER PROTEIN LEAFY 1 411 IPR002910 GO:0003677|GO:0006355
Arst8g03790 421 MobiDBLite consensus disorder prediction 1 34 - -
Arst8g03790 421 Pfam Floricaula / Leafy protein SAM domain 59 135 IPR035079 -
Arst8g03790 421 MobiDBLite consensus disorder prediction 158 246 - -
Arst8g03790 421 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 237 401 IPR035209 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03790 Arst-Chr8 48315527 48318781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03790 1 401 Orphan Transcription Factor Family AT5G61850 60.432 2.07e-154 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Arst8g03790 C_LFY_FLO 1e-108 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03790 - - gsj:114416001 535.028