Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03771 ATGGGAAGAGCTCCTTGTTGTTCAAAAGTAGGGTTGCATAGAGGTCCATGGACTCCAAGAGAAGACACACTCCTCACTAAGTATATTCAAGCTCATGGAGAAGGACAATGGAAATCACTACCAAAAAAAGCTGGACTTTTAAGATGTGGGAAAAGTTGTAGGCTAAGATGGATGAATTATTTGAGACCAGATATAAAGCGTGGAAACATAACTCCTGAAGAAGATGATCTTATAATAAGAATGCATTCTCTCTTGGGAAACAAATGGTCCCTCATAGCTGGAAGATTGCCGGGAAGAACTGACAACGAGATCAAGAATTATTGGAACACGCATCTAAGCAAGAAGATGAATGATTCGAAGGAGAAGGATGAAAAAGAAGGAGGAGAAACCGTCGCTAAAAAGAAAAATAGGAAGAACAAGAACAATAGTAAGAGAGAAAAGAACAAGAAGAAAAACAAAGGGTCAAAAGAAGAAGAATCACCAAAAACACAAGTTTATTTACCAAAACCTATTAGGGTGAAGCCATCAAATTTGGCTAGAACAAATAGTTCTTCCTTTACTTCTTTTGATTCCAACAATTCGGCATCAACGAGCCAGGAGAAAGAAGAAGATAACAATAACAATAACAATGGCGAGGGCGAGGGCGACGTCACAAAAGCATGGACGGAGGAAACAAACAACTTGGTATTTTTGGGTGAAATTGGTGTGAACAAGAAAAATAATATGGATGAAAATGATGGGTTTGGATTCTATTTTGATGGCCATGAAGACTTGGTCCTCAATAATAATAATTCAGATATGGAGGGTCAATCCTATAATTATTATGGAATGGAGGATCATCTTAATCATCATGGAACATTAGAGAAGCTATATGAAGAGTATTTGCAGGTTTTGAATATGGAAGATAACATGTATGAGTTGGATTCTTTTGCTGAGTCTCTAATGGTGTAA 951 0.3733 MGRAPCCSKVGLHRGPWTPREDTLLTKYIQAHGEGQWKSLPKKAGLLRCGKSCRLRWMNYLRPDIKRGNITPEEDDLIIRMHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHLSKKMNDSKEKDEKEGGETVAKKKNRKNKNNSKREKNKKKNKGSKEEESPKTQVYLPKPIRVKPSNLARTNSSSFTSFDSNNSASTSQEKEEDNNNNNNGEGEGDVTKAWTEETNNLVFLGEIGVNKKNNMDENDGFGFYFDGHEDLVLNNNNSDMEGQSYNYYGMEDHLNHHGTLEKLYEEYLQVLNMEDNMYELDSFAESLMV 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03771 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Arst8g03771 316 Coils Coil 133 153 - -
Arst8g03771 316 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Arst8g03771 316 CDD SANT 16 61 IPR001005 -
Arst8g03771 316 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Arst8g03771 316 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Arst8g03771 316 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Arst8g03771 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Arst8g03771 316 MobiDBLite consensus disorder prediction 176 217 - -
Arst8g03771 316 MobiDBLite consensus disorder prediction 115 217 - -
Arst8g03771 316 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 218 - -
Arst8g03771 316 SMART sant 13 63 IPR001005 -
Arst8g03771 316 SMART sant 66 114 IPR001005 -
Arst8g03771 316 Gene3D - 71 116 - -
Arst8g03771 316 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Arst8g03771 316 Gene3D - 14 66 - -
Arst8g03771 316 CDD SANT 71 112 IPR001005 -
Arst8g03771 316 FunFam Myb transcription factor 11 67 - -
Arst8g03771 316 MobiDBLite consensus disorder prediction 115 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03771 Arst-Chr8 48101704 48103273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03771 1 116 MYB Transcription Factor Family AT5G49330 75.000 2.35e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst8g03771 Myb_DNA-binding 1.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03771 K09422 - gmx:100803345 337.806