Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03747 ATGGAATCTGGTGATAGTAATAGTACTGTATCATCATTGATCATGATGGATGATGAAAATGTGCATCATCCACATCACAATCATCATCATCATCAGTATTCTTCTTCAATCAACAAGGTTCATCATAGCAGTGGTGGTGGTCCCACAGCTACAAGTGTTCATGAGCTTCTTGAGTGTCCTGTTTGCACAAATTCAATGTACCCTCCAATCCATCAGTGCCACAATGGACATACCCTTTGTTCAACTTGTAAGACAAGGGTACATAACCGGTGTCCTACTTGTAGACAAGAACTCGGTGACATAAGGTGTTTGGCATTGGAGAAGATTGCGGAATCACTAGAATTGCCTTGCAGATATACCTCTCTTGGCTGTCCTGAGATTTTTCCATATTACAGCAAACTCAAACACGAGTCTCTTTGTAACTTCAGACCTTACAACTGCCCCTATGCCGGATCAGATTGCTCTATTGTCGGGGATATTCCCTACCTTGTTGCTCATTTAAGGGATGATCATAGGGTTGATATGCATTCTGGATGCACTTTTAACCATCGCTATGTCAAGTCTAATCCTATGGAAGTCGAAAACGCTACGTGGATGCTGACTGTAAGCATATAAAGTTTAATATGGAGTTCTAAGTTTGGTAAAAACATCACAATTCTAAAATGTTACTTATGCTTAAGCTGTTTTGTTGGTTTTAAAATTATGAGCTTAGAATTACTTATTATTTCTGGCGACGAAAGAGATGCACGGAGCTATAGCTACAGCTTGGAAGTAGGAGGAAATGGGCGGAAACTAACCTTCGAGGGAAGTCCTAGAAGCATAAGAGATAGCCACAAGAAAGTTAGAGATAGCCATGACGGCCTCATTGTATACCGAAACATGGCGCTTTTCTTCTCCGGTGGGGACCGGAAAGAGCTGAAGCTGAGAGTAACTGGAAGGATATGGAAAGAACAGCAAAACCCGGAAAGTGGAGTGTGCTTACCAAATCTGTGCAGCTAG 999 0.4174 MESGDSNSTVSSLIMMDDENVHHPHHNHHHHQYSSSINKVHHSSGGGPTATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKIAESLELPCRYTSLGCPEIFPYYSKLKHESLCNFRPYNCPYAGSDCSIVGDIPYLVAHLRDDHRVDMHSGCTFNHRYVKSNPMEVENATWMLTVSIXSLIWSSKFGKNITILKCYLCLXSCFVGFKIMSLELLIISGDERDARSYSYSLEVGGNGRKLTFEGSPRSIRDSHKKVRDSHDGLIVYRNMALFFSGGDRKELKLRVTGRIWKEQQNPESGVCLPNLCS 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03747 333 MobiDBLite consensus disorder prediction 1 15 - -
Arst8g03747 333 MobiDBLite consensus disorder prediction 1 49 - -
Arst8g03747 333 ProSiteProfiles Zinc finger RING-type profile. 59 95 IPR001841 -
Arst8g03747 333 SUPERFAMILY TRAF domain-like 112 316 - -
Arst8g03747 333 CDD RING-HC_SIAHs 57 95 - -
Arst8g03747 333 SUPERFAMILY RING/U-box 48 98 - -
Arst8g03747 333 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 112 167 IPR013083 -
Arst8g03747 333 FunFam E3 ubiquitin-protein ligase SINAT3 109 167 - -
Arst8g03747 333 FunFam E3 ubiquitin-protein ligase SINAT5-like 168 312 - -
Arst8g03747 333 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 234 312 IPR008974 GO:0005515
Arst8g03747 333 PANTHER E3 UBIQUITIN PROTEIN LIGASE SIAH 39 318 - -
Arst8g03747 333 Pfam Seven in absentia protein family 101 312 IPR018121 GO:0005737|GO:0006511|GO:0007275
Arst8g03747 333 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 111 IPR013083 -
Arst8g03747 333 ProSiteProfiles Zinc finger SIAH-type profile. 112 172 IPR013010 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03747 Arst-Chr8 47787337 47791389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03747 34 319 C3H Transcription Factor Family AT2G41980 65.385 1.16e-133 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03747 K04506 - gmx:100782764 526.554