Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03734 ATGATGGTCAAGCGGACAGTGAGAACCGAAATGCCAAACCTGAAAAGGTGCAAGCTGGAAGAAGGAGAAGAAGCAGAGCATGATTCTGAGAGCTATGGTTGTTCCGGGAATCAGAAGAAGCGGAAGGTTAACGAATTATGCTCTCGCGATGCTGAAGATTTCAGCAGTGGTTCTGGCTCTTGGTGCAGCGAAGGAGCGTATTGGAATGGTGGTGCTGAGGTTCAGTCCAATTCAAATTCCGTACAGCTGAACGGTAAAATGGCACCGCGTGACGGCGGCGGAGATGGGACTCGGCCGCCATTGTTGCGTTCTACACGGGGCCGCCATCAATCCTTGCCGTCGAGGTTCAATGACTCGGTTCTTGATTCATGGAAGAACCAAGGAGTCAAAGTGGAGGACACGGATTCCAGCTTTGAGGATGATGCAGAAGAAGAGAAGAAAAAAAAGGGTGATAATTATTGTGGTCTTGAAGTGAATATAGGGATGGAAAAGAATGGTTTTGTTAAAACTGAGAGTAACAGTTCTGTGCTTAGTTTTGAGGGTGGTGTGGAGCAGAAGGTTAAAACTACTGGGAATGGTGGTGAAAGGAGGAAACAGGTTTACAGGCCGGAGGATTTCGCGTTGGGTGATATAGTTTGGGCGAAGTGTGGGAAGAGGTACCCTGCTTGGCCTGCTGTGGTGATTGATCCTATCTTGCAGGCTCCGAAATCCGTCCTCAGCTGCTGCGTTCCTGGTGCACTCTGCGTCATGTTCTTTGGCTTTTCGAAAAATGGGACCCAAAGGGACTATGCTTGGGTGAAGCAGGGAATGATATTCCCCTTCTCTAAGTTCATGGAAAGATTCCAGGGTCAGACACAGTTGTACAAGAGCAAACCGAGTGACTTTCGCATGGCATTGGAGGAGGCAATGCTGGCTGTAGATGGTCTTCTCAACTCACAGCTGGAAGTAGAGGAAGTAACTTATGTAAATGCTTATCCGAATGGACATTTAGAGGCCCCAGCCATGCCTGTTGATTATGAATACCACTGCGAGGATCAAGATACAATATCTTGTGCTGGCTGTTATTTGATATTGCCATGCAAAACGATGAAGAAGATGAAGGACCCAAGTGGTGCATCTCAATTTTATTGCAAACATTGCTTTAAGTTACGAAAATCAAAACAATATTGTGGCATTTGCAAAAAGATTTGGCACCATTCACATGGTGGGAATTGGGTGTGCTGTGATCGCTGTAATGTTTGGGTGCATGCTGAGTGCGATAAAATATCCATTGAACTTTTCAAGGATCTTGAAAACACAGATTACTATTGCCCAGAGTGCAAGGGAAATTTCAATAAGAAATTACCCATACCCAAAACAAGCAAGTCAAAAAAGAAGTATATCGTGGAAGACAGATTGGTAGATAGTAGCCAAAAATCTATAGTACCTGAGACGGTAACAGTGGTGTGCAATGGCATGGAAGGGCTCTACTTCCCAAAGCTTCATTTAATTATGTGCAAGTGTAGCTCTTGTGGTTCAAGGAAGCAGACACCAAGTGAATGGGAAAGGCACACAGGTAGCAGAGCTAAAAAATGGAAACATAGTGTGAAAGTGAAAAGCATGATGCTCCCACTAGAAAAATGGATCACAGAAAACATTTCACAAGATGGAGTTCCACAGCAGTTAGATCAGCAGCAGGTGCTTAGCTTTTTGCAAGAAAATTATGAGCCAGTTCATGCAAAATGGACAACAGAAAGATGTGCAGTTTGCAGATGGGTTGAAGATTGGGAAGATAATAAAATTATTATTTGTAACAGGTGCCAAATAGCAGTCCACCAAGAATGCTATGGGGCAAAGAATGTTCAAGATTTTACTTCTTGGGTTTGTAGAGTATGTGAAACACCAGATGTGGAGAGAGACTGTTGCCTCTGTCCTGTAAAAGGTGGTGCTCTAAAACCAACTGATGTTGAGATGCTATGGGTTCATGTGACATGTGCTTGGTTTCAACCTCAAGTGGTTTTTCAAAATCATGAGGCCATGGAACCCGCGGTAGGAATACTGAGAATTCCTCCTAATACCTTTGTTAAGACCTGTGTGATCTGTAAACAAAGCCATGGTTCCTGTACAAGTTGTTGCAAGTGTGCTACTTATTTTCATGTGATGTGTGCTTCGAGAGCAGGATATAGCACAGAATTGCATTCTGTGGAGAAGAATGGGACTCAAATAACAAAGAAGCTAATATACTGTGCAGTTCACAGGGTCCCAAATCCAGAATCTGTATTGGTTGTACATACTCCCCTGGGGGTTTTCTCTCCCAGAGCCTCTCTTGAAAATCATAGAAGATGCTTCCGGGGGTCAAGGCTGGTTTCATCAAAGAATGTAGAGCTTATTCAATCTTCAACCTCTGAAGGTGACAAGATTGAGCCATTTTCTGCTGCAAGATGTCATGTATACCGTAGATCCCTGAATAAGAAGGCTGAAATACCAATAATTCACTTGCTGAAGGGACCCAGCCATCATTCTTTAGGTGCAATAACTCAGTTGAACAGCTATAAGGATGCTGAAGATTCTAAAGTTTTTACTTCTTTTAAGGAACGACTTCATCATTTACAGAAAATGGAAAAGCTTCGAGTTTGCTTTGGAAAATCGGGTATCCATGGATGGGGTCTTTTTGCTCGTAGAGATATACAAGAAGGAGAGATGGTTGTTGAGTATCGCGGGGAGTGGGTAAGGCGTAGTGTTGCTGATTTAAGGGAAGTGAAATACCGTGCAGAAGGGAAAGATTGCTATCTGTTCAAGATCAGTGAGGATGTGGTAATTGATGCAACGTACAAGGGCAATATAGCACGGCTAATAAACCATTCTTGCATGCCAAATTGCTATGCAAGGATTATGAGTTTGGGTGATCAAGAGAGTCGGATCGTTCTCATTGCCAAGACGAAAGTTTCTGCTGGCGAAGAATTAACGTATGATTACTTATTCGATCCAGATGAGCAGGATGAACTGAAAGTTCCCTGCCTTTGCAAAGCCTCCAATTGTAGGAAATTTATGAACTAG 3036 0.4345 MMVKRTVRTEMPNLKRCKLEEGEEAEHDSESYGCSGNQKKRKVNELCSRDAEDFSSGSGSWCSEGAYWNGGAEVQSNSNSVQLNGKMAPRDGGGDGTRPPLLRSTRGRHQSLPSRFNDSVLDSWKNQGVKVEDTDSSFEDDAEEEKKKKGDNYCGLEVNIGMEKNGFVKTESNSSVLSFEGGVEQKVKTTGNGGERRKQVYRPEDFALGDIVWAKCGKRYPAWPAVVIDPILQAPKSVLSCCVPGALCVMFFGFSKNGTQRDYAWVKQGMIFPFSKFMERFQGQTQLYKSKPSDFRMALEEAMLAVDGLLNSQLEVEEVTYVNAYPNGHLEAPAMPVDYEYHCEDQDTISCAGCYLILPCKTMKKMKDPSGASQFYCKHCFKLRKSKQYCGICKKIWHHSHGGNWVCCDRCNVWVHAECDKISIELFKDLENTDYYCPECKGNFNKKLPIPKTSKSKKKYIVEDRLVDSSQKSIVPETVTVVCNGMEGLYFPKLHLIMCKCSSCGSRKQTPSEWERHTGSRAKKWKHSVKVKSMMLPLEKWITENISQDGVPQQLDQQQVLSFLQENYEPVHAKWTTERCAVCRWVEDWEDNKIIICNRCQIAVHQECYGAKNVQDFTSWVCRVCETPDVERDCCLCPVKGGALKPTDVEMLWVHVTCAWFQPQVVFQNHEAMEPAVGILRIPPNTFVKTCVICKQSHGSCTSCCKCATYFHVMCASRAGYSTELHSVEKNGTQITKKLIYCAVHRVPNPESVLVVHTPLGVFSPRASLENHRRCFRGSRLVSSKNVELIQSSTSEGDKIEPFSAARCHVYRRSLNKKAEIPIIHLLKGPSHHSLGAITQLNSYKDAEDSKVFTSFKERLHHLQKMEKLRVCFGKSGIHGWGLFARRDIQEGEMVVEYRGEWVRRSVADLREVKYRAEGKDCYLFKISEDVVIDATYKGNIARLINHSCMPNCYARIMSLGDQESRIVLIAKTKVSAGEELTYDYLFDPDEQDELKVPCLCKASNCRKFMN 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03734 1011 MobiDBLite consensus disorder prediction 18 35 - -
Arst8g03734 1011 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 2 1011 IPR025780 -
Arst8g03734 1011 Pfam PWWP domain 209 305 IPR000313 -
Arst8g03734 1011 SUPERFAMILY Tudor/PWWP/MBT 200 313 - -
Arst8g03734 1011 ProSiteProfiles PWWP domain profile. 208 277 IPR000313 -
Arst8g03734 1011 FunFam Histone-lysine N-methyltransferase 843 1011 - -
Arst8g03734 1011 ProSiteProfiles Post-SET domain profile. 995 1011 IPR003616 -
Arst8g03734 1011 ProSiteProfiles Zinc finger PHD-type profile. 387 443 IPR019787 -
Arst8g03734 1011 CDD SET_SETD1-like 858 1007 - -
Arst8g03734 1011 CDD PHD_TCF19_like 390 440 - -
Arst8g03734 1011 FunFam Histone-lysine N-methyltransferase 629 748 - -
Arst8g03734 1011 PANTHER PHD FINGER PROTEINS 12 440 - -
Arst8g03734 1011 SMART PHD_3 389 441 IPR001965 -
Arst8g03734 1011 SMART PHD_3 690 746 IPR001965 -
Arst8g03734 1011 SMART PHD_3 579 626 IPR001965 -
Arst8g03734 1011 Pfam SET domain 880 985 IPR001214 GO:0005515
Arst8g03734 1011 ProSiteProfiles Zinc finger PHD-type profile. 577 628 IPR019787 -
Arst8g03734 1011 SUPERFAMILY FYVE/PHD zinc finger 387 448 IPR011011 -
Arst8g03734 1011 Gene3D - 195 315 - -
Arst8g03734 1011 SMART PWWP_4 206 275 IPR000313 -
Arst8g03734 1011 Pfam PHD-zinc-finger like domain 633 745 - -
Arst8g03734 1011 CDD PWWP_AtATX3-like 209 309 - -
Arst8g03734 1011 ProSitePatterns Zinc finger PHD-type signature. 580 625 IPR019786 -
Arst8g03734 1011 Gene3D - 471 556 IPR010919 -
Arst8g03734 1011 SMART set_7 869 992 IPR001214 GO:0005515
Arst8g03734 1011 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 629 747 IPR013083 -
Arst8g03734 1011 SUPERFAMILY SAND domain-like 477 537 IPR010919 -
Arst8g03734 1011 SUPERFAMILY FYVE/PHD zinc finger 577 642 IPR011011 -
Arst8g03734 1011 SMART PostSET_3 995 1011 IPR003616 -
Arst8g03734 1011 ProSiteProfiles Extended PHD (ePHD) domain profile. 631 746 IPR034732 -
Arst8g03734 1011 SUPERFAMILY SET domain 862 1008 IPR046341 -
Arst8g03734 1011 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 381 447 IPR013083 -
Arst8g03734 1011 MobiDBLite consensus disorder prediction 18 37 - -
Arst8g03734 1011 MobiDBLite consensus disorder prediction 128 146 - -
Arst8g03734 1011 Pfam PHD-finger 389 441 IPR019787 -
Arst8g03734 1011 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 568 628 IPR013083 -
Arst8g03734 1011 Pfam PHD-finger 592 626 - -
Arst8g03734 1011 CDD PHD_ATX3_4_5_like 579 625 IPR042011 -
Arst8g03734 1011 Gene3D SET domain 847 1011 IPR046341 -
Arst8g03734 1011 MobiDBLite consensus disorder prediction 127 146 - -
Arst8g03734 1011 MobiDBLite consensus disorder prediction 82 119 - -
Arst8g03734 1011 ProSiteProfiles SET domain profile. 869 986 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03734 Arst-Chr8 47691923 47699219 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03734 580 732 C2H2 Transcription Factor Family AT3G14740 33.750 2.23e-19 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Arst8g03734 zf-HC5HC2H_2 2.7e-27 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03734 - - gmx:100793624 1546.56