Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03733 ATGATGGTCAAGCGGACAGTGAGAACCGAAATGCCAAACCTGAAAAGGTGCAAGCTGGAAGAAGGAGAAGAAGCAGAGCATGATTCTGAGAGCTATGGTTGTTCCGGGAATCAGAAGAAGCGGAAGGTTAACGAATTATGCTCTCGCGATGCTGAAGATTTCAGCAGTGGTTCTGGCTCTTGGTGCAGCGAAGGAGCGTATTGGAATGGTGGTGCTGAGGTTCAGTCCAATTCAAATTCCGTACAGCTGAACGGTAAAATGGCACCGCGTGACGGCGGCGGAGATGGGACTCGGCCGCCATTGTTGCGTTCTACACGGGGCCGCCATCAATCCTTGCCGTCGAGGTTCAATGACTCGGTTCTTGATTCATGGAAGAACCAAGGAGTCAAAGTGGAGGACACGGATTCCAGCTTTGAGGATGATGCAGAAGAAGAGAAGAAAAAAAAGGGTGATAATTATTGTGGTCTTGAAGTGAATATAGGGATGGAAAAGAATGGTTTTGTTAAAACTGAGAGTAACAGTTCTGTGCTTAGTTTTGAGGGTGGTGTGGAGCAGAAGGTTAAAACTACTGGGAATGGTGGTGAAAGGAGGAAACAGGTTTACAGGCCGGAGGATTTCGCGTTGGGTGATATAGTTTGGGCGAAGTGTGGGAAGAGGTACCCTGCTTGGCCTGCTGTGGTGATTGATCCTATCTTGCAGGCTCCGAAATCCGTCCTCAGCTGCTGCGTTCCTGGTGCACTCTGCGTCATGTTCTTTGGCTTTTCGAAAAATGGGACCCAAAGGGACTATGCTTGGGTGAAGCAGGGAATGATATTCCCCTTCTCTAAGTTCATGGAAAGATTCCAGGGTCAGACACAGTTGTACAAGAGCAAACCGAGTGACTTTCGCATGGCATTGGAGGAGGCAATGCTGGCTGTAGATGGTCTTCTCAACTCACAGCTGGAAGTAGAGGAAGTAACTTATGTAAATGCTTATCCGAATGGACATTTAGAGGCCCCAGCCATGCCTGTTGATTATGAATACCACTGCGAGGATCAAGATACAATATCTTGTGCTGGCTGTTATTTGATATTGCCATGCAAAACGATGAAGAAGATGAAGGACCCAAGTGGTGCATCTCAATTTTATTGCAAACATTGCTTTAAGTTACGAAAATCAAAACAATATTGTGGCATTTGCAAAAAGATTTGGCACCATTCACATGGTGGGAATTGGGTGTGCTGTGATCGCTGTAATGTTTGGGTGCATGCTGAGTGCGATAAAATATCCATTGAACTTTTCAAGGATCTTGAAAACACAGATTACTATTGCCCAGAGTGCAAGGGAAATTTCAATAAGAAATTACCCATACCCAAAACAAGCAAGTCAAAAAAGAAGTATATCGTGGAAGACAGATTGGTAGATAGTAGCCAAAAATCTATAGTACCTGAGACGGTAACAGTGGTGTGCAATGGCATGGAAGGGCTCTACTTCCCAAAGCTTCATTTAATTATGTGCAAGTGTAGCTCTTGTGGTTCAAGGAAGCAGACACCAAGTGAATGGGAAAGGCACACAGGTAGCAGAGCTAAAAAATGGAAACATAGTGTGAAAGTGAAAAGCATGATGCTCCCACTAGAAAAATGGATCACAGAAAACATTTCACAAGATGGAGTTCCACAGCAGTTAGATCAGCAGCAGGTGCTTAGCTTTTTGCAAGAAAATTATGAGCCAGTTCATGCAAAATGGACAACAGAAAGATGTGCAGTTTGCAGATGGGTTGAAGATTGGGAAGATAATAAAATTATTATTTGTAACAGGTGCCAAATAGCAGTCCACCAAGAATGCTATGGGGCAAAGAATGTTCAAGATTTTACTTCTTGGGTTTGTAGAGTATGTGAAACACCAGATGTGGAGAGAGACTGTTGCCTCTGTCCTGTAAAAGGTGGTGCTCTAAAACCAACTGATGTTGAGATGCTATGGGTTCATGTGACATGTGCTTGGTTTCAACCTCAAGTGGTTTTTCAAAATCATGAGGCCATGGAACCCGCGGTAGGAATACTGAGAATTCCTCCTAATACCTTTGTTAAGACCTGTGTGATCTGTAAACAAAGCCATGGTTCCTGTACAAGTTGTTGCAAGTGTGCTACTTATTTTCATGTGATGTGTGCTTCGAGAGCAGGATATAGCACAGAATTGCATTCTGTGGAGAAGAATGGGACTCAAATAACAAAGAAGCTAATATACTGTGCAGTTCACAGGGTCCCAAATCCAGAATCTGTATTGGTTGTACATACTCCCCTGGGGGTTTTCTCTCCCAGAGCCTCTCTTGAAAATCATAGAAGATGCTTCCGGGGGTCAAGGCTGGTTTCATCAAAGAATGTAGAGCTTATTCAATCTTCAACCTCTGAAGGTGACAAGATTGAGCCATTTTCTGCTGCAAGATGTCATGTATACCGTAGATCCCTGAATAAGGCTGAAATACCAATAATTCACTTGCTGAAGGGACCCAGCCATCATTCTTTAGGTGCAATAACTCAGTTGAACAGCTATAAGGATGCTGAAGATTCTAAAGTTTTTACTTCTTTTAAGGAACGACTTCATCATTTACAGAAAATGGAAAAGCTTCGAGTTTGCTTTGGAAAATCGGGTATCCATGGATGGGGTCTTTTTGCTCGTAGAGATATACAAGAAGGAGAGATGGTTGTTGAGTATCGCGGGGAGTGGGTAAGGCGTAGTGTTGCTGATTTAAGGGAAGTGAAATACCGTGCAGAAGGGAAAGATTGCTATCTGTTCAAGATCAGTGAGGATGTGGTAATTGATGCAACGTACAAGGGCAATATAGCACGGCTAATAAACCATTCTTGCATGCCAAATTGCTATGCAAGGATTATGAGTTTGGGTGATCAAGAGAGTCGGATCGTTCTCATTGCCAAGACGAAAGTTTCTGCTGGCGAAGAATTAACGTATGATTACTTATTCGATCCAGATGAGCAGGATGAACTGAAAGTTCCCTGCCTTTGCAAAGCCTCCAATTGTAGGAAATTTATGAACTAG 3033 0.4346 MMVKRTVRTEMPNLKRCKLEEGEEAEHDSESYGCSGNQKKRKVNELCSRDAEDFSSGSGSWCSEGAYWNGGAEVQSNSNSVQLNGKMAPRDGGGDGTRPPLLRSTRGRHQSLPSRFNDSVLDSWKNQGVKVEDTDSSFEDDAEEEKKKKGDNYCGLEVNIGMEKNGFVKTESNSSVLSFEGGVEQKVKTTGNGGERRKQVYRPEDFALGDIVWAKCGKRYPAWPAVVIDPILQAPKSVLSCCVPGALCVMFFGFSKNGTQRDYAWVKQGMIFPFSKFMERFQGQTQLYKSKPSDFRMALEEAMLAVDGLLNSQLEVEEVTYVNAYPNGHLEAPAMPVDYEYHCEDQDTISCAGCYLILPCKTMKKMKDPSGASQFYCKHCFKLRKSKQYCGICKKIWHHSHGGNWVCCDRCNVWVHAECDKISIELFKDLENTDYYCPECKGNFNKKLPIPKTSKSKKKYIVEDRLVDSSQKSIVPETVTVVCNGMEGLYFPKLHLIMCKCSSCGSRKQTPSEWERHTGSRAKKWKHSVKVKSMMLPLEKWITENISQDGVPQQLDQQQVLSFLQENYEPVHAKWTTERCAVCRWVEDWEDNKIIICNRCQIAVHQECYGAKNVQDFTSWVCRVCETPDVERDCCLCPVKGGALKPTDVEMLWVHVTCAWFQPQVVFQNHEAMEPAVGILRIPPNTFVKTCVICKQSHGSCTSCCKCATYFHVMCASRAGYSTELHSVEKNGTQITKKLIYCAVHRVPNPESVLVVHTPLGVFSPRASLENHRRCFRGSRLVSSKNVELIQSSTSEGDKIEPFSAARCHVYRRSLNKAEIPIIHLLKGPSHHSLGAITQLNSYKDAEDSKVFTSFKERLHHLQKMEKLRVCFGKSGIHGWGLFARRDIQEGEMVVEYRGEWVRRSVADLREVKYRAEGKDCYLFKISEDVVIDATYKGNIARLINHSCMPNCYARIMSLGDQESRIVLIAKTKVSAGEELTYDYLFDPDEQDELKVPCLCKASNCRKFMN 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03733 1010 SMART PostSET_3 994 1010 IPR003616 -
Arst8g03733 1010 MobiDBLite consensus disorder prediction 18 35 - -
Arst8g03733 1010 SUPERFAMILY Tudor/PWWP/MBT 200 313 - -
Arst8g03733 1010 Gene3D - 195 315 - -
Arst8g03733 1010 ProSiteProfiles PWWP domain profile. 208 277 IPR000313 -
Arst8g03733 1010 Gene3D SET domain 848 1010 IPR046341 -
Arst8g03733 1010 ProSiteProfiles Zinc finger PHD-type profile. 387 443 IPR019787 -
Arst8g03733 1010 PANTHER PHD FINGER PROTEINS 12 440 - -
Arst8g03733 1010 CDD PHD_TCF19_like 390 440 - -
Arst8g03733 1010 FunFam Histone-lysine N-methyltransferase 629 748 - -
Arst8g03733 1010 SMART PHD_3 389 441 IPR001965 -
Arst8g03733 1010 SMART PHD_3 690 746 IPR001965 -
Arst8g03733 1010 SMART PHD_3 579 626 IPR001965 -
Arst8g03733 1010 ProSiteProfiles Zinc finger PHD-type profile. 577 628 IPR019787 -
Arst8g03733 1010 SMART set_7 868 991 IPR001214 GO:0005515
Arst8g03733 1010 SUPERFAMILY FYVE/PHD zinc finger 387 448 IPR011011 -
Arst8g03733 1010 SMART PWWP_4 206 275 IPR000313 -
Arst8g03733 1010 Pfam PHD-zinc-finger like domain 633 745 - -
Arst8g03733 1010 CDD PWWP_AtATX3-like 209 309 - -
Arst8g03733 1010 FunFam Histone-lysine N-methyltransferase 842 1010 - -
Arst8g03733 1010 ProSitePatterns Zinc finger PHD-type signature. 580 625 IPR019786 -
Arst8g03733 1010 Gene3D - 471 556 IPR010919 -
Arst8g03733 1010 ProSiteProfiles Post-SET domain profile. 994 1010 IPR003616 -
Arst8g03733 1010 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 629 747 IPR013083 -
Arst8g03733 1010 SUPERFAMILY SAND domain-like 477 537 IPR010919 -
Arst8g03733 1010 SUPERFAMILY FYVE/PHD zinc finger 577 642 IPR011011 -
Arst8g03733 1010 Pfam PWWP domain 209 305 IPR000313 -
Arst8g03733 1010 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 381 447 IPR013083 -
Arst8g03733 1010 ProSiteProfiles Extended PHD (ePHD) domain profile. 631 746 IPR034732 -
Arst8g03733 1010 SUPERFAMILY SET domain 861 1007 IPR046341 -
Arst8g03733 1010 MobiDBLite consensus disorder prediction 18 37 - -
Arst8g03733 1010 MobiDBLite consensus disorder prediction 128 146 - -
Arst8g03733 1010 Pfam PHD-finger 389 441 IPR019787 -
Arst8g03733 1010 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 568 628 IPR013083 -
Arst8g03733 1010 Pfam SET domain 879 984 IPR001214 GO:0005515
Arst8g03733 1010 Pfam PHD-finger 592 626 - -
Arst8g03733 1010 ProSiteProfiles SET domain profile. 868 985 IPR001214 GO:0005515
Arst8g03733 1010 CDD PHD_ATX3_4_5_like 579 625 IPR042011 -
Arst8g03733 1010 CDD SET_SETD1-like 857 1006 - -
Arst8g03733 1010 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 2 1010 IPR025780 -
Arst8g03733 1010 MobiDBLite consensus disorder prediction 82 119 - -
Arst8g03733 1010 MobiDBLite consensus disorder prediction 127 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03733 Arst-Chr8 47691923 47699221 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03733 580 732 C2H2 Transcription Factor Family AT3G14740 33.750 2.20e-19 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Arst8g03733 zf-HC5HC2H_2 2.7e-27 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03733 - - gmx:100793624 1541.17