Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03730 ATGGGAATCCTAATCAAGAAAATCCTTTCTCTTCTCTTCATCTACCCTCTAATATTAGCTTCTGACTGCGAATTTTCTTGGTGTGAAAGCATGCTCATTCGTTTCCCCTTTCAACTACAAAGCAACCAGCTTCAACGTCCTTATTGTGGTTACCCTGGTTTCAAATTAATCTGCACCAATGACGCCAAAACAGTTCTAGATCTTCCATTCTCTGGAGAATTCTATGTACGCAACATAAACTATCTAACACAGCAGATACAAATCTATGACCCTGATCAGTGCCTTCCAAAACGTCTTCTAAGCCTCAATCTTTCGGGTACCCCCTTCATTGCCATGTTGAGTCGCAACTACACTTTCTTAAGCTGCAATTCTCGCAACGCAGCGCCGCGGTCCGTTCCCATTGATTGCCTGAGCAATTCAACATATTTTGTATCTGCTGTGCCTTCAGGGGACTTGGCCAATAATTCATTGCCAGTTTCATGCAAAGTTATTGGAAGGCTTTCAGTTCCATTTTCAAGCACAACGTTTGTGAGGAATCTTGGTGATGATCTCATCCAAGATCTTCAATTAACATGGAATAAACCTGATTGCAGAGTATGTGAATCACAAGGAAAATTGTGTCAATTTGAGAACAATACCAGTGATAGAATTCGTTGCTCCGATGATTACAATACAGGTGGTACATCAAGGGGACTTTTAGCCTTCAGAATAATCACATTATGCATAATTGGACCAGCTTGTATCTTTGCTGTTGTGTTTGCATGCTGTGTGTGCTACAGAGACAGAGTTTCCAATGCTAATGCTGCAAGGAGAGCACTACAATTAGCAGCAATAACACCACATCCTCCTGAACCTCCCATTACCACTACTTTGGGTTTGGACGAAACTACAATTGACTCTTATGAGAAGCTTGTGCTGGGCGAGAGTAAGAGGGTGCCAGGACCCAATAATGGAACATGTTGGATATGCTTGGCAGAGTACAACTCCAAAGAGACCATTAGATGCATCCCTGAATGCAAACATTGCTTCCATTCAGATTGCATTGATGAGTGGCTTAGAATGAATTCAACATGCCCAGTTTGCAGGAACACTCCGATTCCATCTCCTTCTCCCCTTCATGATATCATGTCTAGTAGTGCACCTTGA 1146 0.4232 MGILIKKILSLLFIYPLILASDCEFSWCESMLIRFPFQLQSNQLQRPYCGYPGFKLICTNDAKTVLDLPFSGEFYVRNINYLTQQIQIYDPDQCLPKRLLSLNLSGTPFIAMLSRNYTFLSCNSRNAAPRSVPIDCLSNSTYFVSAVPSGDLANNSLPVSCKVIGRLSVPFSSTTFVRNLGDDLIQDLQLTWNKPDCRVCESQGKLCQFENNTSDRIRCSDDYNTGGTSRGLLAFRIITLCIIGPACIFAVVFACCVCYRDRVSNANAARRALQLAAITPHPPEPPITTTLGLDETTIDSYEKLVLGESKRVPGPNNGTCWICLAEYNSKETIRCIPECKHCFHSDCIDEWLRMNSTCPVCRNTPIPSPSPLHDIMSSSAP 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03730 381 SUPERFAMILY RING/U-box 319 367 - -
Arst8g03730 381 Pfam Wall-associated receptor kinase C-terminal 145 219 IPR032872 -
Arst8g03730 381 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 287 366 IPR013083 -
Arst8g03730 381 Pfam Wall-associated receptor kinase galacturonan-binding 23 90 IPR025287 GO:0030247
Arst8g03730 381 CDD RING-H2_EL5-like 320 362 - -
Arst8g03730 381 ProSiteProfiles Zinc finger RING-type profile. 320 362 IPR001841 -
Arst8g03730 381 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 7 365 IPR046948 -
Arst8g03730 381 SMART ring_2 320 361 IPR001841 -
Arst8g03730 381 Pfam Ring finger domain 319 362 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03730 Arst-Chr8 47671156 47674915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03730 29 374 C3H Transcription Factor Family AT2G25410 42.571 3.34e-86 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03730 - - aprc:113851081 461.07