Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03725 ATGACTGAGAAAAAGTTTGTTAGATTTGAGGATTGGAGATCAGATTCAAATACAAGCATTATTGAAAAGTATGATCTATCCACTGATGGATTCTTCAAAAGAAAAGTTATAAAAAAACCAGGTGCAAGTCCTACTAATAATAAAAGTGATGGAAAAGAATCAACCAATAAAAAGTGTTCTACTAAGATCAAGGTTCTTGATCCACAAGGTCCATTGCTTCAAAAATGGAACAAAATCTTTGTGATCATATGTGTTATGGCAATTTCTGTGGACCCTCTATTCCTCTACATTCCTGTGATCAATGAAGAGAAGAAGTGCCTTAGTTTGGATAAAAGATTGGAGATTGTTGCTTGTGCTCTTAGAACATTCTTTGATCTTTTCTACATTATTAGGATCTTGTTTCAGTTTAGAACAGGGTTTATTGCACCTTCTTCACGTGTGTTTGGAAGGGGTGAGTTGATTCATGACACAAAAGCCATTGTCATCAGATACTTGTGCTCAGATTTCATCATTGATATTCTATCAATTATTCCACTTCCTCAGATGTACATCTTAGCTATCCTTCCAATACCATCAAGCACATTTCCATACAAGGTAAAGAACATGTTGAAGTTCACAATTCTAGCTCAGTATGTGCCAAGACTTCTGAGGTTGTATCTTTTATTCAAAGAAGTGACAAGCACTTGTGGTATTCTCACTGAGACAGCATGGGCTGGTGCTGCCTATAATCTTTTTCTATATATGCTTGCAAGTCATGTGGTTGGAGCTTTCTGGTACTTGTTCTCAATAGAAGCAGAGGTTAGGTGTTGGCACAAGGTGGTGAAATTTCATAACTACTCCAGTTATGTATACCTTAGCTGTGGTGGAATGGCCAACAATAATCCACAAGTTCAATTACTTTTGAGCAAGGATAATTATTGCCAGCTTGAGAGCCCTGATGACATAAAAGATCAAAGTGTTTTCAATTTCGGAATATATACTCAGGCTCTAATGGCTCATATTGTAGGATCAAGTACAGATTTTCCTCAGAAGTTCTTCTTCTGTTTTTGGTGGGGTTTTCGCAACTTAAGTTCTCTTGGACAAAACCTCTTGTGTAGTACTTACATTGGGGAGAATATATTTGCTATCCTCATTGCCATCTTTGGATTGGTTCTGTTCTCATCACTCATTGGAAACATGCAGAAATATCTACAATCTACAAGCGTAAGTGTTGAAGAGATGAGATTTGAAGAGATGAAAATCAAAAGGAGGGAGGTAGAGCACTGGATGTCCTACAGAATGATACCTAGCTCCTTGAAGGAAAGAATCAGAAGGTATGATAAATACAAATGGCAACAAAATAGGGGTGTTGAGGAGGAAGCATTAACTGGAAGCTTCCCTAAAGATCTCAGAAGGGACATAAAGCGCCATATTTGCTTGCGGTTAATTAGAAGAGTGCCAATGCTTGAGGCCATGAACAACCAGTTATTGGATGCAATGTGTATTAGAATGAAGCCATTCCTTTATACAGAAGACAGCTACATTGTTTGTGAAGGAGATCCAGTCGAAGAAATCCTCTTCATTATGGATGGAAGCCTTGCTTCTGTAACAACAAATGGAGGGAGATCTAGTTTCTTCAACTGTTTTCTCAAGGCTGGTGACTTTTGTGGAGAAGAGCTTTTGGCATGGGCCTTGGATCCTAACTCCTCAAATCTACCCATTTCAACTAGAACAGTACAGACTTTGACAGGAGTTGAAGCCTTTGTTCTCATGGCTGATGACTTGAAGCTTGTTGCTATTCAGTTTCAACGTCTTATGAACATGAAACAGCTCCAACACACTTTCAGGTTCTATTCCCATCAATGGAGGACATGGGCTGCATGTTTCATACAAGTAGCTTGGCGTCGGTACCAGAAAAAGAAGATTGAGAAGGCATTACGTGAAGCAGAACGTGGCATACAAGCTTTTACAAGTAAGGATGGGCTTGATGATGAGAGGTCAACATCATCAAATGATTCTACTGATGTTGGATTTCACAATAGAAAACATAAATCAAGAGTAAGCCTATCAAGTGATGGACCAATAAAAAAGGTGGTTACAAGGATCAAAGTTCTTGACCCACAGGGATCACTACTTCAGAAATGGAACAAAATTTTTGTGATCACAAGTGTGATGGCAATATCTGTTGACCCTCTTTTCTTTTACATCCCAGTGATCAATGACAGGGGGAAATGCCTTAACTTGGATAAAAAGCTAAAGATTACTGCATGTGTTCTTCGCACATTCTTTGATCTTTTCTATGTTCTTCATATCATCTTTCAGTTTAGAACTGGGTTTATTGCTCCTTCTTCTCGCGTATTTGTAAGGGGTATGCTGGTTGATGACACTGGTGCTATAATCAAAAGATACTTAAGTTCACATTTTGTCATTGACATTCTATCAATCATTCCACTTCCACAGATGGTCATCTTAGCTATTGTTCCAATCCCAAGATGCTCAGTTCCATACATGGTAAAGAATCTGTTGAAGTACACAGTAATATCTCAGTATGTACCAAGACTTCTGCGACTCTATCAGTTATTCAAAGAAGAAACAAAAACTTGGGGGGCATTAACTGAGACAGCATGGTTCGGAGCTGCTTATAATCTTCTTCTTTATATCGTTGCAAGTCATGTAATAGGAGCTTCATGGTATTTATTGTCAGTAGAATCGAAGGTTCGCTGTTGGCAGGGACAGTTGAAACATACTAATTTCTCTACCGAATCCTACCTTAGCTGTGGACAATACTATAAGCAAGATGTTCTATCACTGCTGAATAGTTCTATTTCTTGCCCTTACGTTGATACTGAAAACAACATAGATCCAACAGTTTTTGACTTTGGAATATTTACACCAGCTCTACAATCTCGTGTGGTAGAATCAACCACAGACTTCACTCAGAAGTTCTTCTTCTGCTTTTGGTGGGGTTTGCGCAATCTAATTGCTCTTGGGCAAACCCTCCTGTGTAGTACTTATATTTGGGAGAATATCTTTGCTATCATCATAGCCATCTTTGGGCTGGTTCTGTTCTGTTCACTTATAGCAAACGTACAGAAATATCTACATTCCGCAACTGTAAAAGTTCAAGACATGAGATTTGAGGAGATTAAATTCAAGAGGAGGGATGTAGAGCGGTGGATATCCCACCGTAAGCTACCAAAAAACTTGAAGGAAAGAATTAAAAGATATGAACAATACAAATGGCAAGAAAACAAGGGTCTTGAGGAGGAAGACTTAATTGCAAACCTCCCCAAAGATCTCCGAAGGGACATAAAGCGTCATCTTTGCTTGCACTTACTTAAAAAAGTGCCAATGCTTGAGAATGTGGACAAGAGGTTGTTGGATGGCATGTGTGATAGACTGAAGCCAGTCCTTTACACGGAGAAGAGCAACATTGTTTACAAAGGAGATCTGATTGATGAAATGATCTTTGTTATGAGTGGAAAACTTGCTAGTACCACAACAAATGATGGAAGATCTAGTGCTGTCAAATCCTTGCTCTCGGCTGGTGACTTTTGTGGAGAAGAGCTTCTAACATGGGCCTTGAGTCCTAACTCCTTAGATCTACCATTACCAATTTCAACTAGAACAGTAGACACTATATCAGAAGTTGAAGCATTTGCTCTATTGGCTGATGACTTGAAGTTTGTTGTATCTCAATTTCGAAATCTTATAAATAGCAAACAACTCGAGCAAACTTTAAGGTTCTTCTCCCAGCAGTGGAGGACGTGGGCTGCATGTATGATACAGGCAGCATGGCGTCGATACTTGCAAAAAAAGGCTGAGAGGGCCTCTTGTGAAGCAGAAGAACTAGATGCTTTTGCAAATCAGGATGGGCATGCATCTTCACCAAGCTCTGCCACATCTGTATATGTATCAAGGTTTGAGGATCAGAGATTAGAGTCAACTGCAATAACTGAGAAGAGTGGTTGCATTAGTGAGAAATTTCTAAAAAGAAAAGTTAAATCATGTTTGAGTCTAACAAGTGATGGACCAACCATAAAGTTGACTATTTGGAGCCAAGTTATTGATCCACAGGGGCCACTATTTCAGAAATGGAACAAAATTTTTCTAATCACATGTGTGATGGCAATATATGTGGACCCTCTTTTCTTTTACCTCCCAGTGATCAATGACACAGAGAAATGCCTTAGGTTGGATGAAAAACTAAAGATCACTGCTTGTGTTCTTCGCACACTCTTGGATCTTTTATACATTCTTAGGATCATAATTCAGTTTAGAGCAGGGTTTATTGCACCTTCTTCATGTATGTTGGGAAGGGATGAGCTGATTGATGAGACTACTACCACTGTGAAGAAATACTTGCGTTCAGATTTCATTATTGATATTCTATCAATTATTCCACTTCCACAGATGGTCACCTTAGCTATCATTCCAATCCCAAATTGCTCAGTTCCATTCGTGGCAAAGAACTTGCTGAAGTACACAATAATAGTTCAGTATGTGCCAAGAGTTTTGCGACTCTATCTGTTATTCAAAGAAGTAACCAGAACTTATGGCATAATGACCAAGACAGCATGGTCAGGAGCAGCCTTTAATCTTTTCATTTACATGCTAGCAAGTCATGGAATTGGAGCTTTTTGGTATCTACTTTCAGTAGAATCAGAGGTTCGATGTTGGCAGACACACTTGAAGCATAATAAATACTCCACTGCATCCTACCTTAGCTGTGGACAACACTACAAGCAAGATGTTCTATCACTTTTGAACACTTCAACATGCGCTCATGTTGATCCTGATAATAGTACAGATTCAACAGTTTTCAATTTTGGTATTTTTACAACAGCTTTACAATCACGCGTGGTTGAATCAGTTACAGAGTTTCCTCAGAAGTTCTTCTTCTGCTTCTGGTGGGGTTTCTGCAATCTAAGTTCTCTTGGGCAGAACCTTCAATGCAGTACTTACATTTGGGAGAATATCTTTGCTATCTTCATTGCCGTATTGGGATTGATTCTGTTCTCATCACTTATAGGAATCATGCAGAAATATCTACAATCTACATCCCTAAGAGTCGAAGAGATAAGATTTGATGAGATGAAATTCAAAAGAAGAGACATAGAGCGCTGGATGTCCCACCGCATGCTACCAGACACTTTGAAGGAAAGAATTAGGAGGTATGAACAATACAAGTGGCAACAAAATAGGGGTGTTGAGGAGGAAGGAATAATTGGCAGTCTCCCTAAAGATCTCAGAATGGACATAAAGCGTCATCTCTGCTCGGATTTACTTAGAAGAGTACCAATCCTTGAGATCATGGACAGACATCTACTGGATGCCATGTGTGCCAGATTAAAGCCAGTCCTTTATACAGAGAACAGCAGAATTGTTTGCAAAGGAGATCTGATTGATGAAATGCTCTTTATTATACGCGGACAACTTGCTTGTGCCACAACAAATGTTTTCTTCAAGGCTGGTGACTTCTGTGGAGAAGAGCTTATTACGTGGGCCTTTTATCCGAACTCCTCAAATCAATTACCCATTTCAAGAAGATCAATTGAAACAATAACAGAAGTTGAAGCTTTTGTTCTCATGGCTGATGACTTGAAGTTTGTTTTTTCACAATTTCAAGACCTTAATAAAAACAACGAAAAGATCCGTCACTATTACAGGTTCTTTTCCCCGCAATGGAGGACATGGGCTGCATGTTTCATACAAGTAGCTTGGCGTCAGCACCGAAAAAAAGAAGGCAAAGAGAGCATACATGAAGCACAAGAGCTGCATGCTATTGGAAGCGAGCAATGGTGTAGCTCCTCAGTAAGCTTTGCATCCAAAGTACCTGTATCTAACTTATCATGCAAAGCATTACAACCCACACGAAGTGGCAAGCGCAAGAGGATGCCATAG 5883 0.393 MTEKKFVRFEDWRSDSNTSIIEKYDLSTDGFFKRKVIKKPGASPTNNKSDGKESTNKKCSTKIKVLDPQGPLLQKWNKIFVIICVMAISVDPLFLYIPVINEEKKCLSLDKRLEIVACALRTFFDLFYIIRILFQFRTGFIAPSSRVFGRGELIHDTKAIVIRYLCSDFIIDILSIIPLPQMYILAILPIPSSTFPYKVKNMLKFTILAQYVPRLLRLYLLFKEVTSTCGILTETAWAGAAYNLFLYMLASHVVGAFWYLFSIEAEVRCWHKVVKFHNYSSYVYLSCGGMANNNPQVQLLLSKDNYCQLESPDDIKDQSVFNFGIYTQALMAHIVGSSTDFPQKFFFCFWWGFRNLSSLGQNLLCSTYIGENIFAILIAIFGLVLFSSLIGNMQKYLQSTSVSVEEMRFEEMKIKRREVEHWMSYRMIPSSLKERIRRYDKYKWQQNRGVEEEALTGSFPKDLRRDIKRHICLRLIRRVPMLEAMNNQLLDAMCIRMKPFLYTEDSYIVCEGDPVEEILFIMDGSLASVTTNGGRSSFFNCFLKAGDFCGEELLAWALDPNSSNLPISTRTVQTLTGVEAFVLMADDLKLVAIQFQRLMNMKQLQHTFRFYSHQWRTWAACFIQVAWRRYQKKKIEKALREAERGIQAFTSKDGLDDERSTSSNDSTDVGFHNRKHKSRVSLSSDGPIKKVVTRIKVLDPQGSLLQKWNKIFVITSVMAISVDPLFFYIPVINDRGKCLNLDKKLKITACVLRTFFDLFYVLHIIFQFRTGFIAPSSRVFVRGMLVDDTGAIIKRYLSSHFVIDILSIIPLPQMVILAIVPIPRCSVPYMVKNLLKYTVISQYVPRLLRLYQLFKEETKTWGALTETAWFGAAYNLLLYIVASHVIGASWYLLSVESKVRCWQGQLKHTNFSTESYLSCGQYYKQDVLSLLNSSISCPYVDTENNIDPTVFDFGIFTPALQSRVVESTTDFTQKFFFCFWWGLRNLIALGQTLLCSTYIWENIFAIIIAIFGLVLFCSLIANVQKYLHSATVKVQDMRFEEIKFKRRDVERWISHRKLPKNLKERIKRYEQYKWQENKGLEEEDLIANLPKDLRRDIKRHLCLHLLKKVPMLENVDKRLLDGMCDRLKPVLYTEKSNIVYKGDLIDEMIFVMSGKLASTTTNDGRSSAVKSLLSAGDFCGEELLTWALSPNSLDLPLPISTRTVDTISEVEAFALLADDLKFVVSQFRNLINSKQLEQTLRFFSQQWRTWAACMIQAAWRRYLQKKAERASCEAEELDAFANQDGHASSPSSATSVYVSRFEDQRLESTAITEKSGCISEKFLKRKVKSCLSLTSDGPTIKLTIWSQVIDPQGPLFQKWNKIFLITCVMAIYVDPLFFYLPVINDTEKCLRLDEKLKITACVLRTLLDLLYILRIIIQFRAGFIAPSSCMLGRDELIDETTTTVKKYLRSDFIIDILSIIPLPQMVTLAIIPIPNCSVPFVAKNLLKYTIIVQYVPRVLRLYLLFKEVTRTYGIMTKTAWSGAAFNLFIYMLASHGIGAFWYLLSVESEVRCWQTHLKHNKYSTASYLSCGQHYKQDVLSLLNTSTCAHVDPDNSTDSTVFNFGIFTTALQSRVVESVTEFPQKFFFCFWWGFCNLSSLGQNLQCSTYIWENIFAIFIAVLGLILFSSLIGIMQKYLQSTSLRVEEIRFDEMKFKRRDIERWMSHRMLPDTLKERIRRYEQYKWQQNRGVEEEGIIGSLPKDLRMDIKRHLCSDLLRRVPILEIMDRHLLDAMCARLKPVLYTENSRIVCKGDLIDEMLFIIRGQLACATTNVFFKAGDFCGEELITWAFYPNSSNQLPISRRSIETITEVEAFVLMADDLKFVFSQFQDLNKNNEKIRHYYRFFSPQWRTWAACFIQVAWRQHRKKEGKESIHEAQELHAIGSEQWCSSSVSFASKVPVSNLSCKALQPTRSGKRKRMP 1960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03725 1960 CDD CAP_ED 1761 1871 IPR000595 -
Arst8g03725 1960 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 48 653 - -
Arst8g03725 1960 SMART cnmp_10 1761 1883 IPR000595 -
Arst8g03725 1960 SMART cnmp_10 481 610 IPR000595 -
Arst8g03725 1960 SMART cnmp_10 1111 1243 IPR000595 -
Arst8g03725 1960 SUPERFAMILY Voltage-gated potassium channels 67 398 - -
Arst8g03725 1960 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 48 653 - -
Arst8g03725 1960 Gene3D - 78 400 - -
Arst8g03725 1960 Pfam Ion transport protein 1359 1683 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Arst8g03725 1960 Pfam Ion transport protein 708 1033 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Arst8g03725 1960 Pfam Ion transport protein 76 402 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Arst8g03725 1960 SUPERFAMILY cAMP-binding domain-like 410 598 IPR018490 -
Arst8g03725 1960 CDD CAP_ED 481 611 IPR000595 -
Arst8g03725 1960 FunFam Cyclic nucleotide-gated ion channel 1 1688 1752 - -
Arst8g03725 1960 SUPERFAMILY cAMP-binding domain-like 1041 1228 IPR018490 -
Arst8g03725 1960 Gene3D Helix hairpin bin 1689 1752 - -
Arst8g03725 1960 Gene3D Helix hairpin bin 408 472 - -
Arst8g03725 1960 Gene3D Helix hairpin bin 1036 1102 - -
Arst8g03725 1960 ProSiteProfiles cAMP/cGMP binding motif profile. 1761 1836 IPR000595 -
Arst8g03725 1960 SUPERFAMILY cAMP-binding domain-like 1691 1873 IPR018490 -
Arst8g03725 1960 ProSiteProfiles cAMP/cGMP binding motif profile. 1111 1192 IPR000595 -
Arst8g03725 1960 ProSiteProfiles cAMP/cGMP binding motif profile. 481 565 IPR000595 -
Arst8g03725 1960 SUPERFAMILY Voltage-gated potassium channels 699 1027 - -
Arst8g03725 1960 Coils Coil 632 652 - -
Arst8g03725 1960 CDD CAP_ED 1111 1230 IPR000595 -
Arst8g03725 1960 Gene3D - 1362 1680 - -
Arst8g03725 1960 Gene3D Jelly Rolls 479 597 IPR014710 -
Arst8g03725 1960 Gene3D Jelly Rolls 1109 1229 IPR014710 -
Arst8g03725 1960 Gene3D Jelly Rolls 1759 1870 IPR014710 -
Arst8g03725 1960 SUPERFAMILY Voltage-gated potassium channels 1350 1678 - -
Arst8g03725 1960 Gene3D - 711 1029 - -
Arst8g03725 1960 MobiDBLite consensus disorder prediction 653 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03725 Arst-Chr8 47637426 47667857 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03725 3 630 Ion Channels AT5G53130 56.881 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03725 K05391 - ahf:112708046 3523.41