Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03643 ATGATTCCAATAATCAAATTAAAGATTGGAATAGTTTTTTTGAACTTGGCATCAAAAGGATTTTCTGGAACACTTTCTCCCTCAATTGCCAAATTGAAATACTTGGTTAGCTTGGAGTTGCAGGACAACAATCTTGCAGGCCCTTTACCTGACTACATCGCCAACTTAACGCGCCTCGAATATCTTAATCTTGCTGACAATAATTTCAGTGGTTCTGTCCCGGCTACTTGGGGCCGACTTTCAAGTCTAAAGCATCTGTTGTTGAAAGGGAATAAGTTATCTGGACATATTCCAGATACAATTTCAAACCTTACTGGATTGGCAGAATTGGATCTTTCATCTAATGGTCTTACTGGAACTGTCCCAATGCCACTCTTTTCAATTCCAATATTTAATTTTTCGAACACACTTCTTCGTTGCGGCTCTAGCTTGGATCAGCCTTGTGCTTCTAAACCTTCACTTTCTGGTTCAACCAACAAACCAAAACTTGTAAAGGTTGTTGGTTTTGCAAGTTGTGGTTTATTTGCACTGATAATTCTTGGGGCTATCTTTGTATATAGATACCATCACATGCACAGACATAAAACTGATGTCTTTTTTGATGTTTCAGGTGAAGATGAGAGCCAAATTTCCTTTTGGCAACTGAGAAGATTTTCATGGCGTGAACTGCAACACGCGACTAAAAATTTCAGCAAAAGCAATGTAATTGGCACAGGAGGATTTGGAAAAGTTTATAAAGGAGTACTCTCAGATGGCACAAAAGTGGCCGTGAAACGCCTCGCCGATTATCAGGCTCCTGGTGGAGAAGCTGCATTCCAAAGAGAAGTTCAACTTATAAGTGTTGCAGTTCATAAGAATCTGCTAAGATTAATTGGATACTGTACAACCTCAACTGAAAGAATCCTAGTGTACCCTTTCATGGAAAATAGAAGTGTAGCATATCAATTGAGAGATTTAAAAGAAGGTGAGAAAGGTTTAGACTGGGCAATGAGGAAAAATGTGGCATTTGGCACAGCACATGGATTAGATTATTTACATAATCAATGCAACCCTAAGATAATTCACCGTGATTTGAAAGCCGCAAATATTTTATTAGATGATAACTTTGAAGCTGTTCTTGGAGACTTTGGTCTAGCTAAACTTGTTGATACAAGGGTGACTCATGTTACTACTCAAGTGAGAGGCACAATGGGTCATATAGCACCAGAATACTTGTGCACCGGAAAATCATCAGAGAAGACTGATGTGTTTGGATATGGTATAACACTTCTTGAATTGGTCACCGGTCAACGCGCCGTTGACTTATTTCGGCTTCAAGAGGAGGAGGAGGATGTTCTTCTGCTTGATCATATAAAAAAACTATTGAAGGAAGACAGGGTGAAGGACATAGTAGATAGAAACCTAGAGACATATGATTCAGAGGAAGTAGAGAGAATAATTCATGTTGCATTGCTTTGCACAAGAAACTACCCAGAGGAGCGTCCAACAATGTCAGAGATAGTGAAAATGCTTCAAGGAGTGGGTTTGCAAGAGAGATGGAATGAATTGGAGCAACATAATAATGAAGAAGAGGTTAGTAATCAACTCATGTCTCACCAGTTTGTTTGGACTGCTGAATATTCAACCCTTGATCAAGAAGCTATAAGGCTTTCAGCAGCAAGATAA 1665 0.3922 MIPIIKLKIGIVFLNLASKGFSGTLSPSIAKLKYLVSLELQDNNLAGPLPDYIANLTRLEYLNLADNNFSGSVPATWGRLSSLKHLLLKGNKLSGHIPDTISNLTGLAELDLSSNGLTGTVPMPLFSIPIFNFSNTLLRCGSSLDQPCASKPSLSGSTNKPKLVKVVGFASCGLFALIILGAIFVYRYHHMHRHKTDVFFDVSGEDESQISFWQLRRFSWRELQHATKNFSKSNVIGTGGFGKVYKGVLSDGTKVAVKRLADYQAPGGEAAFQREVQLISVAVHKNLLRLIGYCTTSTERILVYPFMENRSVAYQLRDLKEGEKGLDWAMRKNVAFGTAHGLDYLHNQCNPKIIHRDLKAANILLDDNFEAVLGDFGLAKLVDTRVTHVTTQVRGTMGHIAPEYLCTGKSSEKTDVFGYGITLLELVTGQRAVDLFRLQEEEEDVLLLDHIKKLLKEDRVKDIVDRNLETYDSEEVERIIHVALLCTRNYPEERPTMSEIVKMLQGVGLQERWNELEQHNNEEEVSNQLMSHQFVWTAEYSTLDQEAIRLSAAR 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03643 554 Gene3D Transferase(Phosphotransferase) domain 1 307 524 - -
Arst8g03643 554 FunFam Nuclear pore complex protein NUP107 6 123 - -
Arst8g03643 554 Gene3D Phosphorylase Kinase; domain 1 199 306 - -
Arst8g03643 554 FunFam Somatic embryogenesis receptor kinase 1 199 306 - -
Arst8g03643 554 FunFam Somatic embryogenesis receptor-like kinase 1 307 524 - -
Arst8g03643 554 ProSitePatterns Serine/Threonine protein kinases active-site signature. 353 365 IPR008271 GO:0004672|GO:0006468
Arst8g03643 554 Gene3D Ribonuclease Inhibitor 7 150 IPR032675 -
Arst8g03643 554 SUPERFAMILY L domain-like 11 137 - -
Arst8g03643 554 Pfam Protein kinase domain 231 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g03643 554 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 14 514 - -
Arst8g03643 554 SMART serkin_6 230 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g03643 554 ProSitePatterns Protein kinases ATP-binding region signature. 236 258 IPR017441 GO:0005524
Arst8g03643 554 Pfam Leucine rich repeat 35 93 IPR001611 GO:0005515
Arst8g03643 554 ProSiteProfiles Protein kinase domain profile. 230 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g03643 554 SUPERFAMILY Protein kinase-like (PK-like) 208 505 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03643 Arst-Chr8 46805140 46809732 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03643 11 554 Receptor kinase-like Gene Family AT5G10290 55.839 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Arst8g03643 Pkinase 2.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03643 - - pcin:129307818 774.622