Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03624 ATGGCTTCCACCTCTTCTACTTCTAAAAGATCTTGCAAGTATCATGTGTTCCTCAGTTTTAGGGGTGAAGACACTCGCGCTGGATTCACTAGCCATCTCTATGCCGCACTCACAAGGAAGGGAATCACTACCTTCATTGATGACAGCAACCTTCGTAGAGGTGATGTTATTTCAGATGAACTTCTCACAGCAATTGAAGAGTCCATGTTTGCAATCGTTGTTCTCTCACCAAACTACGCTTCCTCCACTTGGTGCTTGGATGAACTCCAAAAGATACTTGAATGCAAGCATAAGTTGGGGCAACACGTCGAAGCAGTGTTCTACGGTGTGGAGCCTTCTGATGTCAGGCACCAGAAAGGAACCTTCGGAGAAGCTTTCTGGAAACATGAATACAAATTCGGACAAGAAAGTGACAAGGTTAGAAGATGGAGAGATGCATTAACACAAGTTGCCGGTTACTCTGGTTGGACCTCCAAAAATCAGAATGAGGCAATATTGGTGGAAAACATTTCTCAGAGTATACATAAAAAATTGATCCCAAACTTGCCTTCTTCCATGAACAAGCTTGTAGGGATTGATTCAAGAGTGGAACAAGTGATTAGTCACATTGGTATCGGGCTTAGTGATGTTCGTTATATAGGCATATGTGGGATGGGCGGCATAGGCAAGACAACTATTGCTAGAATAGTATATGAAGCCATCCAAAGTGAATTTGAAGTTTCTTATTTTCATGCCAGCGTAAGAGAGACATGTGAGAAAAATGGTATTGTTCAAGCACAAAAAGAGCTTGTTGGCCATATCAATGGAAGTTCGAGTAATTTTAATAACGAGTATGATGGGAGGAGAATAATTCAAGCTTCTTTGTATCGCAAAAAGGTTCTTCTTGTTCTTGATGATATAAATGAAGAAAAACAGTTGAAGAATTTGGCCGAGGAACAAGATTGGTTTGGTTCTGGAAGCAGAATAATCATCACAACTAGAGACATGCATCTGCTAAAGATACATGATGCATATAAAATTTACAATGTTGAAGGGTTAGGGGAAAGTGAAGCCTTTGATCTCTTTGGTTTGAAAGCTTTTAAACAACGAAAGCCTGCAGAAGAGTATTTGGATTTGTCCAAACAGGCGGTCCAATATTGTGCTGGTCTTCCATTGGCACTTGAGGTATTGGGTTCCCACCTTTGTGGTAGACCCGTTAAAGATTGGCATAGTGCTCTTGAAAAATTAATGAGCTTTCCACATGTCGGCATTTTTGATACGTTGAAAATAAGTTATGATGGTTTAGATACCATGGACAAGGATATTTTTTTAGATATTGCTTATTTTTTCAAAGGACGTTCCAAAGATGGTGTAATAAAAATATTAGAAAGGTGTGGTTATCATGTTGAAATTGGCATTGCTACTTTGATCGATAGATCTCTACTCACTATGAATGAGAAAGGTAGGTTGGAGATGCATGATTTGGTTGAAGAAATGGGCAAACATATTGTAATTCAGGAATCTCCAAATGATCCTAGCAAGCGTAGCAGGTTGCGGGGTTACGAGGACATCAATCTTGTTCTTACTCAAAACAAGGGAACTGAAGCAACTCGTAGTATCGTTTTACGCGATCAGGATTTCTATCAAGAACAAGACATAATGCGCTGGAGAGATTTAACTTTTTCAGATATATGTCAGTTAAAGTTCCTCATTTTAGATGGCGTGGAAGCTCCAATTCTTAGCTATATTCCTTGTTCATTGAGAGTTTTGCGCTGGAGACGTTGTCCAATGGAAACTCTCCCCTTTATGGATCAAGGCTGTGAGCTAGTTGAAATTAATCTGTCTGATAGCTCCAGCATTGTACAAGTATGGCATGGAAAAAAGTTTCTTGAAAAGCTGAAGTACTTATATCTGAAGTGCTTATATCGGCTGAAACAAATTCCAGATCTTTCTGAAGCTCCCAATCTTGAAATACTTGACGTTCAATGTTGTGATGAACTGAATGATTTTCCCTCGAATCTCACACGCCACAAGAGCCTTGTTAAACTTATTTTATATCGTTGCTCAAGTCTCGAAACTCTTGCGAGTAAATTGGAGATGAATTCCCTCAAGGAACTGGATCTTGGTTTCTGCACAAGTATGAGGAAACCTCCAGAATTTGGAGAATGCATGAAACATTTATCAGTTCTTTCTTTGTGGGGAACAGCCATAGAAGAACTACCCACAACGGTTGGCTGTTTAGTTGGCCTAAAGGAGTTGCGCTTACAGCATTGCCAAAGGCGTACTTGCCTTCCAGACAGCATTCAAAAGTTAAAATTTCTCACATTTTTTAATCTTTCTTACTGTCCAAATGTCTTTCAATCTTTGCATTCTCTATTTGGTCTGACCTCATTGGATACTCTGATATTATCGGGGTGTTTTGTCACATCTCAAGAGTCGTGGTCTTACAATCTTGGCAACTTAGTGTCTTTGACGGATTTGGATTTATCACATAACAATTTTGTAAGGGTTCCAATAAATATCCATAAGCTCCCCAGGCTTAGACATCTGAATCTAGACTACTGTCCTAGTCTGAAGGTCTTACCAGAACTTCCATCAAGTATAAGAGAGCTAAATGCACGAGATTGTGCATCACTGGATACATGGCATTCGAATGTGATATCAAAGGTGTGTTGTGGCTTTGCAGCATCAGCTAACCATGATTCTGATGGGCTCTTGCATATGTGGGTTGCACAGAATGAAGGGGACGAAATTCCATTGTGGTTTGTCCATCAAGAACAGGGTAATGGAGTATCAGTCACATTGCCACATAATGAAACAATGGCACTTGCTCTCTGTTTCCGATTATGCCCAAGGAGAAGTAGTCGTAATTATGTGGTAAATTTGCCAGTGATTTGCAATGGCAAGGAATTCATTAAAAAGCATTTAACTGTGTTGCGTGAAACTAAAAATTCTCAGCATTTCATCCTTTGCTCGAGCAGTGACTATTTTGTTGACCAATTTTGCCGAGACTATCGCTTTGAACTGGTATTTCCTAGTAACGTTGAAATGAAAGCACATAGTTCTGGGGCTCGGTGGGTGTGCAAGCAAGACATCCAGGATTTGAAGAACAGTGGGACTGAAACATCAAAAAGAAAAGCAACTTTTGATCTGAACATGAACATCACCCCACCTTCTTCTCCTTGTAGGAAAAAGATGTTCATGGTTACCCCTTCGTCTGTGTCTCCACTGGAGGAGGAAGAGGAAGAGTAA 3231 0.4008 MASTSSTSKRSCKYHVFLSFRGEDTRAGFTSHLYAALTRKGITTFIDDSNLRRGDVISDELLTAIEESMFAIVVLSPNYASSTWCLDELQKILECKHKLGQHVEAVFYGVEPSDVRHQKGTFGEAFWKHEYKFGQESDKVRRWRDALTQVAGYSGWTSKNQNEAILVENISQSIHKKLIPNLPSSMNKLVGIDSRVEQVISHIGIGLSDVRYIGICGMGGIGKTTIARIVYEAIQSEFEVSYFHASVRETCEKNGIVQAQKELVGHINGSSSNFNNEYDGRRIIQASLYRKKVLLVLDDINEEKQLKNLAEEQDWFGSGSRIIITTRDMHLLKIHDAYKIYNVEGLGESEAFDLFGLKAFKQRKPAEEYLDLSKQAVQYCAGLPLALEVLGSHLCGRPVKDWHSALEKLMSFPHVGIFDTLKISYDGLDTMDKDIFLDIAYFFKGRSKDGVIKILERCGYHVEIGIATLIDRSLLTMNEKGRLEMHDLVEEMGKHIVIQESPNDPSKRSRLRGYEDINLVLTQNKGTEATRSIVLRDQDFYQEQDIMRWRDLTFSDICQLKFLILDGVEAPILSYIPCSLRVLRWRRCPMETLPFMDQGCELVEINLSDSSSIVQVWHGKKFLEKLKYLYLKCLYRLKQIPDLSEAPNLEILDVQCCDELNDFPSNLTRHKSLVKLILYRCSSLETLASKLEMNSLKELDLGFCTSMRKPPEFGECMKHLSVLSLWGTAIEELPTTVGCLVGLKELRLQHCQRRTCLPDSIQKLKFLTFFNLSYCPNVFQSLHSLFGLTSLDTLILSGCFVTSQESWSYNLGNLVSLTDLDLSHNNFVRVPINIHKLPRLRHLNLDYCPSLKVLPELPSSIRELNARDCASLDTWHSNVISKVCCGFAASANHDSDGLLHMWVAQNEGDEIPLWFVHQEQGNGVSVTLPHNETMALALCFRLCPRRSSRNYVVNLPVICNGKEFIKKHLTVLRETKNSQHFILCSSSDYFVDQFCRDYRFELVFPSNVEMKAHSSGARWVCKQDIQDLKNSGTETSKRKATFDLNMNITPPSSPCRKKMFMVTPSSVSPLEEEEEE 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03624 1076 Gene3D - 345 429 IPR042197 -
Arst8g03624 1076 Gene3D - 178 341 IPR027417 -
Arst8g03624 1076 PRINTS Disease resistance protein signature 212 227 - -
Arst8g03624 1076 PRINTS Disease resistance protein signature 380 394 - -
Arst8g03624 1076 PRINTS Disease resistance protein signature 691 707 - -
Arst8g03624 1076 PRINTS Disease resistance protein signature 287 301 - -
Arst8g03624 1076 FunFam Disease resistance protein (TIR-NBS-LRR class) 10 180 - -
Arst8g03624 1076 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 709 IPR044974 GO:0006952
Arst8g03624 1076 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 156 IPR035897 -
Arst8g03624 1076 Gene3D Ribonuclease Inhibitor 711 885 IPR032675 -
Arst8g03624 1076 Gene3D Ribonuclease Inhibitor 543 710 IPR032675 -
Arst8g03624 1076 ProSiteProfiles TIR domain profile. 12 178 IPR000157 GO:0007165
Arst8g03624 1076 Gene3D - 11 177 IPR035897 -
Arst8g03624 1076 SMART till_3 13 153 IPR000157 GO:0007165
Arst8g03624 1076 Pfam C-JID domain 908 1023 IPR045344 -
Arst8g03624 1076 SUPERFAMILY L domain-like 485 871 - -
Arst8g03624 1076 Pfam TIR domain 13 188 IPR000157 GO:0007165
Arst8g03624 1076 Pfam NB-ARC domain 196 415 IPR002182 GO:0043531
Arst8g03624 1076 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 439 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03624 Arst-Chr8 46678568 46688165 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03624 14 775 WRKY Transcription Factor Family AT4G12020 29.757 3.06e-82 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03624 - - ahf:112769348 1680.61