Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03609 ATGGGAGACGGAGGTTCTGGCAACCGCGGCGGCAACAGCAACAATAGCGGCGGCGGAAGCAACAAGCCGGAGTGGCTCCAGCAATACGATCTCATAGGGAAGATCGGAGAAGGCACGTACGGACTCGTGTTCTTGGCGCGCATAAAGTCCCAAACCAATCGCGGCAAATCCATTGCCATCAAGAAATTCAAGCAGTCCAAAGATGGCGACGGTGTTTCTCCCACCGCTATTCGCGAAATCATGCTGCTGAGGGAGATAACCCACGAGAATGTTGTGAAGCTTGTAAATGTACACATCAATCACGCGGACATGTCTCTGTATCTTGCTTTTGATTACGCCGAGCACGACCTTTATGAAATAATTAGACATCATAGGGACAAAGTCAACCATTCCATTAATCAGTACACTGTTAAATCATTACTCTGGCAGTTGCTCAATGGACTAAACTATCTGCACAGTAATTGGATAATACATCGAGATTTAAAGCCCTCAAATATACTGGTTATGGGTGAAGGGGAGGAGCATGGAGTTGTTAAAATTGCTGACTTTGGACTTGCAAGGATATATCAAGCCCCTTTGAAGCCATTATCTGAAAATGGGGTTGTTGTAACCATTTGGTATCGTGCTCCTGAGTTGCTTCTTGGAGCAAAACATTATACTAGTGCTGTTGATATGTGGGCTGTGGGATGCATTTTTGCTGAGTTGTTGACCCTGAAGCCACTATTTCAAGGTGTAGAAGTCAAAGCTACCCCAAATCCCTTTCAGCTCGATCAACTTGACAAGATATTCAAGGTTTTAGGCCATCCCACATTAGAAAAGTGGCCTTCCTTAGCAAATCTCCCCCATTGGCAACAAGATGTTCAACATATACAAGGGCATAAATATGATAACAACAGTCTCTATAATGTTGTTCACCTATCTCCAAAAAGTCCTGCATTTGACCTTTTGTCAAAGATGCTTGAATATGATCCTCGAAAGCGTATTACAGCAGCACAAGCTTTGGAACATGAGTATTTCAAAATTGAACCACAGCCTGGGCGGAATGCCCTTGTACCCTGCCAACCGGGAGAGACATTTGTGAATTATCCCACTCGTCCAGTGGACACAACAACCGATTTTGAAGGGACAACCAATATGCAACCTCCACAGCCGAGTCAGGTTACATCGGGAGCTGCAGTTTCTGGCAGTATGCCTGGTGGTCATGTGTCAAATAGATCTGTTCCTCGACCAATGAATGTTGTTGGGATGCAAAGAATGCCTCATCAGGCAATGCAAGCTTATAATCTTACATCTCAGGCAGGGATGGGTGGTGGAATGAACCCTGGTGGCATGCCGATGCAACGAGGTGTACCACAGCCGCATCAGCAACAGCAGTTGAGGAGAAGAGACCAAATGGGGATGCCAGGATACCCTCAACAAAAGTCAAGACGTATATAA 1437 0.4558 MGDGGSGNRGGNSNNSGGGSNKPEWLQQYDLIGKIGEGTYGLVFLARIKSQTNRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHRDKVNHSINQYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEHGVVKIADFGLARIYQAPLKPLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGVEVKATPNPFQLDQLDKIFKVLGHPTLEKWPSLANLPHWQQDVQHIQGHKYDNNSLYNVVHLSPKSPAFDLLSKMLEYDPRKRITAAQALEHEYFKIEPQPGRNALVPCQPGETFVNYPTRPVDTTTDFEGTTNMQPPQPSQVTSGAAVSGSMPGGHVSNRSVPRPMNVVGMQRMPHQAMQAYNLTSQAGMGGGMNPGGMPMQRGVPQPHQQQQLRRRDQMGMPGYPQQKSRRI 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03609 478 Pfam Protein kinase domain 29 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g03609 478 ProSitePatterns Protein kinases ATP-binding region signature. 35 62 IPR017441 GO:0005524
Arst8g03609 478 Gene3D Transferase(Phosphotransferase) domain 1 112 353 - -
Arst8g03609 478 PANTHER CELL DIVISION PROTEIN KINASE 27 344 - -
Arst8g03609 478 FunFam Cyclin-dependent kinase e-1 17 112 - -
Arst8g03609 478 MobiDBLite consensus disorder prediction 7 22 - -
Arst8g03609 478 MobiDBLite consensus disorder prediction 377 393 - -
Arst8g03609 478 MobiDBLite consensus disorder prediction 434 478 - -
Arst8g03609 478 SMART serkin_6 29 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g03609 478 CDD STKc_CDK8_like 28 339 - -
Arst8g03609 478 FunFam Putative cyclin-dependent kinase E-1 113 352 - -
Arst8g03609 478 MobiDBLite consensus disorder prediction 377 407 - -
Arst8g03609 478 MobiDBLite consensus disorder prediction 1 22 - -
Arst8g03609 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Arst8g03609 478 Gene3D Phosphorylase Kinase; domain 1 19 111 - -
Arst8g03609 478 SUPERFAMILY Protein kinase-like (PK-like) 24 340 IPR011009 -
Arst8g03609 478 ProSiteProfiles Protein kinase domain profile. 29 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03609 Arst-Chr8 46594954 46600905 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03609 22 478 Core Cell Cycle Gene Families AT5G63610 76.890 0.0 713
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Arst8g03609 Pkinase 1.7e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03609 K02208 - gmx:100813433 849.351