Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03608 ATGGGAGACGGAGGTTCTGGCAACCGCGGCGGCAACAGCAACAATAGCGGCGGCGGAAGCAACAAGCCGGAGTGGCTCCAGCAATACGATCTCATAGGGAAGATCGGAGAAGGCACGTACGGACTCGTGTTCTTGGCGCGCATAAAGTCCCAAACCAATCGCGGCAAATCCATTGCCATCAAGAAATTCAAGCAGTCCAAAGATGGCGACGGTGTTTCTCCCACCGCTATTCGCGAAATCATGCTGCTGAGGGAGATAACCCACGAGAATGTTGTGAAGCTTGTAAATGTACACATCAATCACGCGGACATGTCTCTGTATCTTGCTTTTGATTACGCCGAGCACGACCTTTATGAAATAATTAGACATCATAGGGACAAAGTCAACCATTCCATTAATCAGTACACTGTTAAATCATTACTCTGGCAGTTGCTCAATGGACTAAACTATCTGCACAGTAATTGGATAATACATCGAGATTTAAAGCCCTCAAATATACTGGTTATGGGTGAAGGGGAGGAGCATGGAGTTGTTAAAATTGCTGACTTTGGACTTGCAAGGATATATCAAGCCCCTTTGAAGCCATTATCTGAAAATGGGGTTGTTGTAACCATTTGGTATCGTGCTCCTGAGTTGCTTCTTGGAGCAAAACATTATACTAGTGCTGTTGATATGTGGGCTGTGGGATGCATTTTTGCTGAGTTGTTGACCCTGAAGCCACTATTTCAAGGTGTAGAAGTCAAAGCTACCCCAAATCCCTTTCAGCTCGATCAACTTGACAAGATATTCAAGGTTTTAGGCCATCCCACATTAGAAAAGTGGCCTTCCTTAGCAAATCTCCCCCATTGGCAACAAGATGTTCAACATATACAAGGGCATAAATATGATAACAACAGTCTCTATAATGTTGTTCACCTATCTCCAAAAAGTCCTGCATTTGACCTTTTGTCAAAGATGCTTGAATATGATCCTCGAAAGCGTATTACAGCAGCACAAGCTTTGGAACATGAGTATTTCAAAATTGAACCACAGCCTGGGCGGAATGCCCTTGTACCCTGCCAACCGGGAGAGACATTTGTGAATTATCCCACTCGTCCAGTGGACACAACAACCGATTTTGAAGGGACAACCAATATGCAACCTCCACAGCCGGTTACATCGGGAGCTGCAGTTTCTGGCAGTATGCCTGGTGGTCATGTGTCAAATAGATCTGTTCCTCGACCAATGAATGTTGTTGGGATGCAAAGAATGCCTCATCAGGCAATGCAAGCTTATAATCTTACATCTCAGGCAGGGATGGGTGGTGGAATGAACCCTGGTGGCATGCCGATGCAACGAGGTGTACCACAGCCGCATCAGCAACAGCAGTTGAGGAGAAGAGACCAAATGGGGATGCCAGGATACCCTCAACAAAAGTCAAGACGTATATAA 1431 0.4556 MGDGGSGNRGGNSNNSGGGSNKPEWLQQYDLIGKIGEGTYGLVFLARIKSQTNRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHRDKVNHSINQYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEHGVVKIADFGLARIYQAPLKPLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGVEVKATPNPFQLDQLDKIFKVLGHPTLEKWPSLANLPHWQQDVQHIQGHKYDNNSLYNVVHLSPKSPAFDLLSKMLEYDPRKRITAAQALEHEYFKIEPQPGRNALVPCQPGETFVNYPTRPVDTTTDFEGTTNMQPPQPVTSGAAVSGSMPGGHVSNRSVPRPMNVVGMQRMPHQAMQAYNLTSQAGMGGGMNPGGMPMQRGVPQPHQQQQLRRRDQMGMPGYPQQKSRRI 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03608 476 Pfam Protein kinase domain 29 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g03608 476 ProSitePatterns Protein kinases ATP-binding region signature. 35 62 IPR017441 GO:0005524
Arst8g03608 476 FunFam Cyclin-dependent kinase e-1 17 112 - -
Arst8g03608 476 MobiDBLite consensus disorder prediction 7 22 - -
Arst8g03608 476 MobiDBLite consensus disorder prediction 375 405 - -
Arst8g03608 476 MobiDBLite consensus disorder prediction 375 390 - -
Arst8g03608 476 Gene3D Transferase(Phosphotransferase) domain 1 112 353 - -
Arst8g03608 476 SMART serkin_6 29 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g03608 476 CDD STKc_CDK8_like 28 339 - -
Arst8g03608 476 PANTHER CELL DIVISION PROTEIN KINASE 27 344 - -
Arst8g03608 476 MobiDBLite consensus disorder prediction 432 476 - -
Arst8g03608 476 FunFam Putative cyclin-dependent kinase E-1 113 352 - -
Arst8g03608 476 MobiDBLite consensus disorder prediction 1 22 - -
Arst8g03608 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Arst8g03608 476 Gene3D Phosphorylase Kinase; domain 1 19 111 - -
Arst8g03608 476 SUPERFAMILY Protein kinase-like (PK-like) 24 340 IPR011009 -
Arst8g03608 476 ProSiteProfiles Protein kinase domain profile. 29 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03608 Arst-Chr8 46594954 46600905 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03608 22 476 Core Cell Cycle Gene Families AT5G63610 77.609 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Arst8g03608 Pkinase 1.7e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03608 K02208 - gmx:100813433 854.358