Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03603 ATGCAAGGTGGATTAGAGTTACCGCCAGGGTTCAGGTTTCACCCGAGCGACGAGGAATTGGTGAACCACTATCTCTGCAAGAAATGCGCAAAGCAATCAATTGCTGCTCCAATAATTAAAGAAATCGATTTGTACAAGTTCGATCCGTGGCAGCTTCCAGAGATGGCGTTGTACGGAGAGAAGGAGTGGTACTTTTTTTCGCCGAGGGATAGGAAATATCCGAACGGATCCCGGCCGAACCGGGCGGCTGGGAGCGGGTACTGGAAGGCGACCGGGGCGGATAAGCCGATAGGGAAGCCGAAGGCGTTAGGGATAAAGAAAGCGCTAGTGTTCTACGCCGGAAAGGCCCCGAAAGGAGTGAAGACTAATTGGATTATGCATGAGTACCGTCTCGCCAATGTTGACAGATCCGCCGCCAACAAACTCAACAACAACAACTTGAGGCTTGATGATTGGGTGTTGTGTCGAATCTACAACAAGAAAGGGAAGATTGAGAAATTCAACTCTGCCACAACAGGGTTGGAACAGAAACTACCAAAGTTTTCCCCAGGAGAGATACTTCACTATGATCATGAGCATGAGCATGAGACCAAGCCAAAGATTATCCACAATTTCTCCAACAATGAGCACCAATTGTACATGGACACATCAGATTCCGTTCCAAGGCTGCACACGGACTCTAGCTGCTCGGATCACGCGGTTTCGCCGGACGCCACCTGCGACAAGGAGGTGGAGAGCAACCCAAAGTGGAGCAATGAGCTAGATATGCAGCTGTTTGATACCTTTGATTTTCAGCTCAACAACTATGATAATAACCTCCCAATGAATGATGATGACCTTTTTGGAAATCAGTTCCAAATGAATCAGCTCATGTCTTTCCAAGACACATTCTTGTTCCCACAAAAGCCATTTTGA 915 0.4776 MQGGLELPPGFRFHPSDEELVNHYLCKKCAKQSIAAPIIKEIDLYKFDPWQLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSAANKLNNNNLRLDDWVLCRIYNKKGKIEKFNSATTGLEQKLPKFSPGEILHYDHEHEHETKPKIIHNFSNNEHQLYMDTSDSVPRLHTDSSCSDHAVSPDATCDKEVESNPKWSNELDMQLFDTFDFQLNNYDNNLPMNDDDLFGNQFQMNQLMSFQDTFLFPQKPF 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03603 304 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Arst8g03603 304 FunFam NAC transcription factor 16 164 - -
Arst8g03603 304 ProSiteProfiles NAC domain profile. 7 160 IPR003441 GO:0003677|GO:0006355
Arst8g03603 304 SUPERFAMILY NAC domain 4 160 IPR036093 GO:0003677|GO:0006355
Arst8g03603 304 Gene3D NAC domain 16 165 IPR036093 GO:0003677|GO:0006355
Arst8g03603 304 MobiDBLite consensus disorder prediction 224 246 - -
Arst8g03603 304 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03603 Arst-Chr8 46573811 46575854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03603 5 304 NAC Transcription Factor Family AT1G01720 59.740 2.40e-121 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst8g03603 NAM 9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03603 - - adu:107463232 636.721