Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03580 ATGATGAATCCGTGGGATATCAGAGACCCGTGGGATATGATAGACTTTGATGCCGATGAAGCACGGCAGTTTCAGTTTGAGTTTCCGCCTCTGCCTGAGCCCGTCTGGAATGGGGACGAAAAAAAGATTGTTGCCGCCAATGTAGGTGATCCCCAGCCCCAGCCGTGTGCCATGGACGTGAGTGGTAATGAACCACCTCAGCTGGTTATTGATGAGTGTTTGGCCGAAGCAATGAACATGACAGAGCAGTATTGGGAAAGCCCATTATCTGGTTATCAACCACTTCAGTGTCAGCCTCAGTCATGTGCCATTGACGTGTGTGGTAATCAACCACCTCAGCTACCGTCTCCGTCTCAGTCTCAGCCTTGGTCTCGGGCACTTCAGTTTCAGCCTCAGCCATGTGCCATTGACGTGTGTGGTAATCAACCACCTGAACTACCGTCTCAGCCCCAGCCCCAGCCTTGGTCTAGGCCACTTCAGTCTCAGCCTCAACCGTGTGCCATTGACGTGTCTGGAAATCAACCTACTCAGCTACCGTCTCAGCCTCAGCCGTGTGCCATTGGCATGTGTGGTAATCTACCACCTCAGCTACCGCCTCAGCCTCAGCCTCAGCCTCAGCCTCAGCTTCAGCCTCGGCCTCAGCCTCAGTCTCGGCCTTGGTCTCGGTCTCGGCCTCGGCTTCTTTCTCACCCTCGGCCTCAGTCTCAGAGGGATATAGTAAGGACGGTGACGGATGAGTTTTTCGCTGACACGTGTGGTTATCCACCACCTCAGCCTCAGCCTCAGACTCAGTGGGATTCGAGGAACATGTTAGAGCTGATTCCTGATGTCGGTGGTCATCAACCACTTCAACCTCAACCTCCGGTCTGGACTTGGGAGGAGAACAAAGCCTTTGAGTCGGTTATTACCAGTTGTTTTCAGGATGCTATCGACAACCGTTGGGAGGACGTTGCTGCTCGTCTCCCCGGCAGGACCCCGGCACAGCTGCAAGAGCACTTTCAGAAGCTGATGAACGACATCAAAGCCATCCATAACGGTCATCATACAAGCACTCCTCTCTCCATCCCCATCATCAATGCAACAACACCACCACCATCACAGCCTTATTCGACGGATCATCATCACAGGGTGGAGGTCGTGCCAGCTGCAGAGGAGGAGGTCGTGCCAACTGCACAAGAGGAGGCAGCACCAACAAACACAGGATATCATTGGACCGAAGATGAACATAGGTTATTTATTAAAGGGTACCAAGAAGAAGGTTCACATTGGAAAAGAATTTCAGAATATTATGTAAAAACAAAAACTCCGAGTCAAATTTCCAGTCATGCTCAGAAACATTTTTTACATCAAGAAGATTTGGCTAAAGGAAAAAAGCTAAGAAAAAGCATTTTTGATGTAATTTGA 1404 0.505 MMNPWDIRDPWDMIDFDADEARQFQFEFPPLPEPVWNGDEKKIVAANVGDPQPQPCAMDVSGNEPPQLVIDECLAEAMNMTEQYWESPLSGYQPLQCQPQSCAIDVCGNQPPQLPSPSQSQPWSRALQFQPQPCAIDVCGNQPPELPSQPQPQPWSRPLQSQPQPCAIDVSGNQPTQLPSQPQPCAIGMCGNLPPQLPPQPQPQPQPQLQPRPQPQSRPWSRSRPRLLSHPRPQSQRDIVRTVTDEFFADTCGYPPPQPQPQTQWDSRNMLELIPDVGGHQPLQPQPPVWTWEENKAFESVITSCFQDAIDNRWEDVAARLPGRTPAQLQEHFQKLMNDIKAIHNGHHTSTPLSIPIINATTPPPSQPYSTDHHHRVEVVPAAEEEVVPTAQEEAAPTNTGYHWTEDEHRLFIKGYQEEGSHWKRISEYYVKTKTPSQISSHAQKHFLHQEDLAKGKKLRKSIFDVI 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03580 467 ProSiteProfiles Myb-like domain profile. 290 337 IPR001005 -
Arst8g03580 467 SUPERFAMILY Homeodomain-like 397 452 IPR009057 -
Arst8g03580 467 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 287 466 IPR043363 -
Arst8g03580 467 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 404 451 IPR017930 -
Arst8g03580 467 NCBIfam myb-like DNA-binding domain, SHAQKYF class 401 450 IPR006447 GO:0003677
Arst8g03580 467 MobiDBLite consensus disorder prediction 136 237 - -
Arst8g03580 467 MobiDBLite consensus disorder prediction 145 159 - -
Arst8g03580 467 Gene3D - 403 451 - -
Arst8g03580 467 SUPERFAMILY Homeodomain-like 289 345 IPR009057 -
Arst8g03580 467 SMART sant 400 449 IPR001005 -
Arst8g03580 467 SMART sant 286 339 IPR001005 -
Arst8g03580 467 MobiDBLite consensus disorder prediction 160 183 - -
Arst8g03580 467 Pfam Myb-like DNA-binding domain 289 336 IPR001005 -
Arst8g03580 467 Pfam Myb-like DNA-binding domain 404 446 IPR001005 -
Arst8g03580 467 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 311 341 IPR017930 -
Arst8g03580 467 MobiDBLite consensus disorder prediction 194 214 - -
Arst8g03580 467 ProSiteProfiles Myb-like domain profile. 404 447 IPR001005 -
Arst8g03580 467 Gene3D - 286 349 - -
Arst8g03580 467 CDD SANT 290 337 IPR001005 -
Arst8g03580 467 CDD SANT 404 447 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03580 Arst-Chr8 46392515 46400185 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst8g03580 Myb_DNA-binding 8.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03580 - - ahf:112707954 721.465