Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03570 ATGTCTTCAAAGGGCAAGAGGAAGGAGGAGCATGACAACGCTTCTGATGGCGACTCTGAAGGCCATGCACCGCCCAAGAAAACCTCCAAAACCGCCACCACCACCAACGCCGATTCTGAGGACCCCGACTCAATCGTTGTCTGCGAGATTTCGAAGAACAGGAGGGTTTCGGTGAGGAACTGGCAGGGGAGAATTGTCGTCGACATTCGTGAGTTTTACGTCAAAGATGGCAAGCAACTCCCTGGAAAGAAAGGTATCTCGTTGACCATGGATCAGTGGAATGTGCTTCGTAACCACGTTGAAGAAATTGACAAGGCAGTTACTGAGAATTCCTGA 336 0.503 MSSKGKRKEEHDNASDGDSEGHAPPKKTSKTATTTNADSEDPDSIVVCEISKNRRVSVRNWQGRIVVDIREFYVKDGKQLPGKKGISLTMDQWNVLRNHVEEIDKAVTENS 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03570 111 Pfam Transcriptional Coactivator p15 (PC4) 48 99 IPR003173 GO:0003677|GO:0006355
Arst8g03570 111 MobiDBLite consensus disorder prediction 1 43 - -
Arst8g03570 111 MobiDBLite consensus disorder prediction 26 41 - -
Arst8g03570 111 SUPERFAMILY ssDNA-binding transcriptional regulator domain 47 108 IPR009044 GO:0003677|GO:0006355
Arst8g03570 111 Gene3D Transcriptional Coactivator Pc4; Chain A 38 111 IPR009044 GO:0003677|GO:0006355
Arst8g03570 111 MobiDBLite consensus disorder prediction 1 25 - -
Arst8g03570 111 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 13 110 IPR045125 GO:0003713|GO:0060261
Arst8g03570 111 FunFam Putative transcriptional co-activator 38 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03570 Arst-Chr8 46342803 46345036 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Arst8g03570 PC4 1.4e-25 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03570 K25815 - gmx:100820368 156.762