Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03520 ATGGATATTCTTAACTCCATGATTATCGTTGCTTACTTATTACTTGTTTCCTCTGTCACAGTTTCCTCTGCCAAAGTTTCCTCTGTCACAGTTTCCATGGCAGTCAATGATTCAATAGGTATGTCCAAGTCTATCAGTGATGATGGCAATGACAAAACCATAGTATCCAAAGATGGAGTATTTGAGCTTGGCTTCTTCAGCCCCGGCAGTTCAATGAAGCGTTACCTGGGGATTTGGTATAAGAAAAGTTCCATGTATACTGTTGTTTGGGTTGCCAACAGGGACAAACCCATCGATTTTGTCTCAGCTGGAATATTAACATTGGACATCACTGGGAATCTTATCCTTACCCAAAATGATTCTGTTGTTTGGAGCACAAACTCTCAAAGACAAGCACAGAATCCAGTGGCACAGCTCATGGACAGCGGCAATCTTGTGGTATGGAATGATGGGGGTCCAAACTCAGAAGACATTTTGTGGCAAAGCTTTGACTATCCGTCGGATACGATATTGCCGGGAATGAAGGTGGGATGGGACCTCAAACGAGGTCTCGAATGGCGAATAACATCTTGGAAGAGTCCAAATGATCCAGCTCCTGGAGATTTCTCATGGGGTTTAGTGCTCAACGAATATCCTGACTTTTATATGAAAGGACGAACAAGGCTCAACCGGTTTGGACCATGGAATGGCCTTTATTTCAGTGGCTTCCGAGATCAAAATCCAAGCTCTGTTTATGAATTCACATATGTCACTAGCTATGATGCCAAGTTTCCCTCCAATAAGGATGAGATTTACTACACGTATACTTTAAAGAATACTTCTATCTTGTCGAGAGTCCACCTAGACCAAACTGGTGGCTTTCATTTCTATATTTGGGCAGAAGAAGATCAGCAAAATTGGGAGCTCTATGAGATGTACTCATCCAGAGACCAGTGTGATAATTATGGCGTTTGCGGGTCAAACTCAAAATGCTTAATTGATGAATCACCAATGTGCCAATGTTTAGAAGGTTTCAGTCCCAAGTCACCACAAGAATGGGATATGAGGAATTGGACAAAAGGATGTGTCCGGACTAAACCCTTAACCTGCAATGACATTTCCATCAATGACATTTTTGTCAAATTTGTAGCCTTGAAGGTTCCAGATACTACACATACATGGTTGGATGAGAATATAGGTCTAGATGAATGCAGAGCAAGGTGCTTGAATAACTGCTCTTGTATGGCCTTTAGTAACTCTGATATAAGAGGATCAGGTAGTGGTTGTGTTTTATGGTTTGGTGATCTTATTGACATGAGACAGTTCAATACTAAACAAACTCGTGAGCAAGATCTATATATTCGTATGGCTAATGCTGAGTCTCAAAGTGAGAGCAAGATGAACATAAGAACTATAGTTGCTATAACTATTCCAACATTATGTGGGGTGCTTTTACTCTCTGTTTATGTTGTCTACAGAATCCGAAGGAACCTTGTTGAGAAGTCAATGGTCAGAGATAACATTGAAAAACATGTAGAGGATCTCCCGTTGTTTGCTCTGCCGACAATTAGTATGGCCACTAGCAACTTCTGGATAGAGAATAAGATTGGACAAGGCGGTTTTGGACCTGTATATAAGGGAAAATTATCAGATGGGCGACAAATTGCTGTAAAGAGACTTTCAAGGAGCTCTGGACAAGGAGTGACCGAGTTCATAAATGAAGTAAAACTGATTGCTAAACTTCAGCATAGAAATCTTGTAAGGCTTCTTGGCTGTTGCATTCAAGGACAAGAGAAGCTACTAATTTATGAATACATGGCTAATGGTAGCTTAGACTCCTTTATTTTTGATCACACCAAAGGGAAATTGCTGAGTTGGCCTCATCGCTTCCACATTATACTTGGAATTGCTAGGGGGCTTCTATATCTTCATCAAGATTCCCGATTAAGGATAATTCATAGAGATCTCAAAGCAAGTAATGTTTTACTTGATGATAAGCTGAATCCAAAAATATCTGATTTTGGAATGGCTAAAGCTTTTGGAGGAGATCAAACTGAAGGAAACACAAATAGAGTAGTTGGAACTTAG 2067 0.4035 MDILNSMIIVAYLLLVSSVTVSSAKVSSVTVSMAVNDSIGMSKSISDDGNDKTIVSKDGVFELGFFSPGSSMKRYLGIWYKKSSMYTVVWVANRDKPIDFVSAGILTLDITGNLILTQNDSVVWSTNSQRQAQNPVAQLMDSGNLVVWNDGGPNSEDILWQSFDYPSDTILPGMKVGWDLKRGLEWRITSWKSPNDPAPGDFSWGLVLNEYPDFYMKGRTRLNRFGPWNGLYFSGFRDQNPSSVYEFTYVTSYDAKFPSNKDEIYYTYTLKNTSILSRVHLDQTGGFHFYIWAEEDQQNWELYEMYSSRDQCDNYGVCGSNSKCLIDESPMCQCLEGFSPKSPQEWDMRNWTKGCVRTKPLTCNDISINDIFVKFVALKVPDTTHTWLDENIGLDECRARCLNNCSCMAFSNSDIRGSGSGCVLWFGDLIDMRQFNTKQTREQDLYIRMANAESQSESKMNIRTIVAITIPTLCGVLLLSVYVVYRIRRNLVEKSMVRDNIEKHVEDLPLFALPTISMATSNFWIENKIGQGGFGPVYKGKLSDGRQIAVKRLSRSSGQGVTEFINEVKLIAKLQHRNLVRLLGCCIQGQEKLLIYEYMANGSLDSFIFDHTKGKLLSWPHRFHIILGIARGLLYLHQDSRLRIIHRDLKASNVLLDDKLNPKISDFGMAKAFGGDQTEGNTNRVVGT 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03520 688 SUPERFAMILY alpha-D-mannose-specific plant lectins 88 197 IPR036426 -
Arst8g03520 688 SMART serkin_6 523 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g03520 688 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 599 688 - -
Arst8g03520 688 CDD PAN_AP_plant 360 450 - -
Arst8g03520 688 Pfam D-mannose binding lectin 87 192 IPR001480 -
Arst8g03520 688 ProSiteProfiles PAN/Apple domain profile. 363 450 IPR003609 -
Arst8g03520 688 Pfam Protein tyrosine and serine/threonine kinase 525 677 IPR001245 GO:0004672|GO:0006468
Arst8g03520 688 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 32 163 - -
Arst8g03520 688 Gene3D Phosphorylase Kinase; domain 1 497 598 - -
Arst8g03520 688 CDD B_lectin 49 166 IPR001480 -
Arst8g03520 688 Pfam S-locus glycoprotein domain 224 342 IPR000858 GO:0048544
Arst8g03520 688 Pfam PAN-like domain 368 432 IPR003609 -
Arst8g03520 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Arst8g03520 688 ProSiteProfiles Protein kinase domain profile. 523 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g03520 688 SMART ntp_6 367 449 IPR003609 -
Arst8g03520 688 SUPERFAMILY Protein kinase-like (PK-like) 509 688 IPR011009 -
Arst8g03520 688 ProSiteProfiles EGF-like domain profile. 308 344 IPR000742 -
Arst8g03520 688 SMART blect_4 45 166 IPR001480 -
Arst8g03520 688 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 22 682 - -
Arst8g03520 688 Gene3D - 30 163 IPR036426 -
Arst8g03520 688 Gene3D Transferase(Phosphotransferase) domain 1 599 688 - -
Arst8g03520 688 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 488 598 - -
Arst8g03520 688 ProSiteProfiles Bulb-type lectin domain profile. 30 160 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03520 Arst-Chr8 45835091 45837992 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03520 465 688 Receptor kinase-like Gene Family AT4G23190 55.752 2.92e-78 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst8g03520 PK_Tyr_Ser-Thr 1.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03520 - - gmx:100812007 838.565