Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03483 ATGCAGCATCTGCTACATGGAACGCTTAGGGTAACAATATATGAAGCTGATAAGTTGCAAACGGGATGTAATTTGGATTTCTGTGCCAAGGGCACAACACACAAGGGGAAGAGATTCCTAGCCCAAGTCAAAGGATGTCTGCTGTGCAGGCCTGAGATTGTTGGAAGGAGACTATACGCAACAGTTGATCTAGACAAAGCAAGAGTTGGAAGAACAAGAATGATTGGAAACCAACCTTCACACCCAAAATGGAATGAAACATTTCAAATTTACTGCGCTCACACCATCTCTCAAATTGTCTTCACCGTCAAAGATGGCAATCCAATCGGCGCAACNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGAGAACTCCTTCAAGGCCACATTGTTAGCAGATGGCTCGAGATTCTCGACGACCAAGACCGTTTCCCACTTCACGGCGCTCGAATTCGCGTAAGCGTTCAATTCTTCGCTGTAACTGATCATGATTACTCCACCGGGATAACGCCGTCGTTTAACGGCGTTCCTAGAACATTCTTCAACATGAGAAAAGGTTGTAAGGTTACACTGTACCAAGACGCTCACGTTCTTCCTGGCGCACTACCTTGGATTCCGTTAACCGTAGGGAGATACTATGATGAGCCTCCACGGTGTTGGGAAGATATTTACAATGCTATCAGGAATGCGAAACATTTGATTTACATAACCGGTTGGTCGGTTTATACCGAGATAACGTTGGTTAGGGACAAAACGACAGGACCTAGTGTCGTTACGCTTGGGGAGATTCTTAAGGAGAGAGCGGAGGAGGGTGTTCGAGTTCTTATGCTTGTTTGGGACGATAGATCTTCCGTGCCGCAGTTTAAGAAAGATGGGTTAATGGGAACCCACGATCAAGAAACAGAACAGTATTTTAGGAATACTAAGGTGAAATGTGTTCTTTGTCCGCGAAATCCTGATGATGGGAGAAGCATTGTTCAGGGGATTCAGACCTCAACAATGTTCACCCATCATCAGAAAAGTGTGGTTGTTGATGGCAATGTCGAAGGGAATAATACTAAAAGAGGGATCATAAGTTTTATTGGCGGGATTGATCTTTGTGATGGAAGATATGATACTCAAGAACATCCTTTGTTTTCGAGTCTAAATACTGTCCACCGTGATGACTTCCATCAACCGAATTTCCCCGGCGCTTCGATCAAGAAAGGCGGCCCGAGGGAGCCGTGGCATGACGTGCATTGCAAGCTAGAAGGACCGGTTGCTTGGGATGTGTTGTACAATTTTGAACAGAGGTGGGAGAAGCAAGTTGGGAAGAATCAGAACCTGTTATTCACACTTGATGAGCTTGATGAAATTGTTGTGCATCCAAGTGAGGCTTCTGCTACATTGGAAGAAGACAGGGATTCTTGGAATGTTCAGTTGTTTAGGTCGATCGATGGCGGCGCAGTTTATGGATTCCCACAAAACCCTGAAGAAGTTGCTGAATTAGGCCTTGTTAGTGGCAAAGACAATGTGATAGATAGAAGCATTCAAGATGCATACATTCATGCGATTCGGCGTGCCAAGAATTTCATCTACATTGAGAATCAGTACTTCCTAGGGAGTTCATATGGTTGGAAATCATCTGATATACAAGTTGAGGATATTAATGCCTTGCAACTTATACCAAAGGAGCTTTCACTCAAGATTTGTAAGAGCATTGAAGCAGGACAAAGGTTTGTTGTGTATGTTGTGATTCCGATGTGGCCGGAAGGTGTGCCTGAAAGTGCTTCAGTTCAGGCAATTTTGGACTGGCAGAGAAGGACTATGGAAATGATGTATAGTGACATTGCTGAGTCCATAAAGAAGAAGGGGATGGAAGCACATCCTAGGGATTATTTGACATTCTTTTGCCTTGGGAAGAGGGAGCCTAAGATGGAAGGTGAATATGTTCCTACACAACAACCTGAACCTGATAGTGACTATATAAGAGCGCAGAATGCTAGGAGGTTCATGATCTATGTTCATTCCAAGATGATGATAGTGGATGATGAATACATAATAATTGGTTCAGCCAACATAAACCAAAGATCAATGGATGGGGGAAGAGACACAGAGATAGCAATGGGAGCATTCCAACCACACCAAAGAGTGCCACGTGGCAACAAACCAGAGGGCCACGTGCACGCATTCAGAAGAGCCCTATGGTACGAACACCTAGGGGACCCACTTGCACTGGACGAGGTTTTCAACCGCCCAGAAAGTGAGGAGTGTGTGAAGCTTGTGAACCATCTTGCTAAGAAGAATTGGGATTTGTACACTCAAGATGAGTTTGATGTTAACACACCACTTCATCACTTGTTGCAGTACCCTGTACACGTGGCAAGTGATGGTACCATAACAACGTTGCCTGGCTTTGAATGTTTTCCGGATACTAAGGCTCATGTTCTTGGATCAAAATCTGAGTACCTTCCTCCAATACTCACCACCTAG 2469 0.4415 MQHLLHGTLRVTIYEADKLQTGCNLDFCAKGTTHKGKRFLAQVKGCLLCRPEIVGRRLYATVDLDKARVGRTRMIGNQPSHPKWNETFQIYCAHTISQIVFTVKDGNPIGATXXXXXXXXXRELLQGHIVSRWLEILDDQDRFPLHGARIRVSVQFFAVTDHDYSTGITPSFNGVPRTFFNMRKGCKVTLYQDAHVLPGALPWIPLTVGRYYDEPPRCWEDIYNAIRNAKHLIYITGWSVYTEITLVRDKTTGPSVVTLGEILKERAEEGVRVLMLVWDDRSSVPQFKKDGLMGTHDQETEQYFRNTKVKCVLCPRNPDDGRSIVQGIQTSTMFTHHQKSVVVDGNVEGNNTKRGIISFIGGIDLCDGRYDTQEHPLFSSLNTVHRDDFHQPNFPGASIKKGGPREPWHDVHCKLEGPVAWDVLYNFEQRWEKQVGKNQNLLFTLDELDEIVVHPSEASATLEEDRDSWNVQLFRSIDGGAVYGFPQNPEEVAELGLVSGKDNVIDRSIQDAYIHAIRRAKNFIYIENQYFLGSSYGWKSSDIQVEDINALQLIPKELSLKICKSIEAGQRFVVYVVIPMWPEGVPESASVQAILDWQRRTMEMMYSDIAESIKKKGMEAHPRDYLTFFCLGKREPKMEGEYVPTQQPEPDSDYIRAQNARRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDTEIAMGAFQPHQRVPRGNKPEGHVHAFRRALWYEHLGDPLALDEVFNRPESEECVKLVNHLAKKNWDLYTQDEFDVNTPLHHLLQYPVHVASDGTITTLPGFECFPDTKAHVLGSKSEYLPPILTT 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03483 822 ProSiteProfiles C2 domain profile. 1 134 IPR000008 -
Arst8g03483 822 SMART pld_4 332 369 IPR001736 GO:0003824
Arst8g03483 822 SMART pld_4 663 690 IPR001736 GO:0003824
Arst8g03483 822 Pfam Phospholipase D C terminal 739 812 IPR024632 -
Arst8g03483 822 SMART C2_3c 8 145 IPR000008 -
Arst8g03483 822 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 663 690 IPR001736 GO:0003824
Arst8g03483 822 Gene3D Endonuclease Chain A 482 706 - -
Arst8g03483 822 FunFam Phospholipase D 476 709 - -
Arst8g03483 822 SUPERFAMILY Phospholipase D/nuclease 170 444 - -
Arst8g03483 822 CDD C2_plant_PLD 4 157 - -
Arst8g03483 822 Gene3D Endonuclease Chain A 207 463 - -
Arst8g03483 822 PANTHER PHOSPHOLIPASE D 4 811 IPR015679 -
Arst8g03483 822 Pfam C2 domain 7 108 IPR000008 -
Arst8g03483 822 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 332 369 IPR001736 GO:0003824
Arst8g03483 822 Pfam Phospholipase D Active site motif 332 369 IPR001736 GO:0003824
Arst8g03483 822 Pfam Phospholipase D Active site motif 664 690 IPR001736 GO:0003824
Arst8g03483 822 SUPERFAMILY Phospholipase D/nuclease 509 740 - -
Arst8g03483 822 PIRSF PLD_plant 1 822 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Arst8g03483 822 PIRSF PLD_plant 1 822 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Arst8g03483 822 Gene3D C2 domain 3 138 IPR035892 -
Arst8g03483 822 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 157 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03483 Arst-Chr8 45602673 45610220 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03483 2 822 Phospholipase D Gene Family (Wang group) AT3G15730 61.779 0.0 1029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03483 K01115 - gmx:100794115 1188.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g03483 8 45602673 45610220 Arst8g03483 8 45602673 45610220 ECH
Arst8g03484 8 45611393 45618241 Arst8g03483 8 45602673 45610220 ECH