Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03456 ATGGATCGTCCCTCTGATGATCTAGAATCTTCCAAGAACAAGAACAATGAAGACACTACTACTATTCCCTCCTCCTTTTCCCCTTTTGAATCCTCCAATCCCAGCATCAGCAATGAAGTAGAAAATTCATCTCCATCAAAGCATCATCATGAATATGATCATGATCTTAATGATGATGATTACTTTCTTGGTGAATCATACACACCAGAGCTTGTTCTGTCACCAGAAACCCAATCAATCTTATTAAGTGGCCTACGTATTGGAGACGATGGTGATCTTCTTGAAGATCTTTGTGATAACAACTTCGAATTTAATGTGGAATCATCACAAGAATGGATAGATAGCAATTTGTTTGCAGATGAGATTCTAGGAATCGAACCTTCCCTTGATCATTATTATTCACCCTACCCCACGGGTAATGAAGAGGACATTGACCTTATGGAAACAGTGCAATGTGATGATGAAGTGAATAATAGCGACCTTGTAATAATTGATGCACCAATTCAGGAAGAGGAAGCACCAAACTTCAAGTTGAAGCCTTTTGGTTTGCATTTGAATAGGCTCATAAAATCTACAAAAAGGGTTCATCCTGAGACACATGAAAATGTTGTAGTTGGGAGTAGTAGTAGTAGTAATAATAAAATAAAAAGCATTTTGATCTCACAAGGTAGCAATGGAAAATCAGTAGTAAGAGCTGTTGTTGATGAGACTCAGAGCCATCAAGACACCACTTCCAATGATTGTGTTCTCATTTCTCATGATCTTAACAAGACAATAATCCAAGAGAATAGTGAGAGTAATAATGGTTGTACATGTAAGAAGAGTGCATGCTTGCTCCTGTACTGTGAATGTTTTGCTGCTAAAGGTTATTGTGCAGAGTGTTGTACTTGTGAAGGATGCTTAAACAGACAAGAACATGAAGACAAAGTTAACGATGCTAGGGACAAAATCAAATCTCGTAATCCATTTGCATTTTCTCCTGAGATGGTTCCATCGGCTAGTAACCAAGAAGAAGAACATGAAGCAGCCAAAGATACATCAAGAGAATTGAAACCAAGTAAATTCTTCACTTATTTGCCACGTGTCGGTTTAGTAGAATCAAACACCATCAGCACTAATTCTACAAAACATGATGCTGATGATGACAACATTTCTAAAGAGAAACTTAACCAAACTGGTGGAGGATACAAAAAACATGCATCAAACACAAGTGATGGTAAAAGAGGATGTACATGTAAGAAGAATAAATGTGTGAACCTTTATTGTGAATGTTTTCGTGCTGAAATCTACTGTTCTGAGGCTTGTGCTTGCGAAGGGTGCTTAAATAGAGAAGAACATTTACACAAAATTAATGAAGCTAAGGAATATATTAAAAGGCGTTATCCATTAGCATTTGCTCCAAGGATTGTTCAAACTCATCTTTCCTCCCCCAATAATACGGATAATGAAAATGTTAAGACAGCATCATCATCATCAGCAGCAGCAAGGCACAAAAGAGGTTGCAGATGCATAAAGTCAAATTGTATGCAGAAGTATTGTGTATGTTTTGAGGTTGAGGTTGGATGCTCCAGTCTTTGTGAATGCAAGGAATGCAAAAATCCATATGGCAAGAACAAAGATTCAGGTCATTAG 1632 0.3744 MDRPSDDLESSKNKNNEDTTTIPSSFSPFESSNPSISNEVENSSPSKHHHEYDHDLNDDDYFLGESYTPELVLSPETQSILLSGLRIGDDGDLLEDLCDNNFEFNVESSQEWIDSNLFADEILGIEPSLDHYYSPYPTGNEEDIDLMETVQCDDEVNNSDLVIIDAPIQEEEAPNFKLKPFGLHLNRLIKSTKRVHPETHENVVVGSSSSSNNKIKSILISQGSNGKSVVRAVVDETQSHQDTTSNDCVLISHDLNKTIIQENSESNNGCTCKKSACLLLYCECFAAKGYCAECCTCEGCLNRQEHEDKVNDARDKIKSRNPFAFSPEMVPSASNQEEEHEAAKDTSRELKPSKFFTYLPRVGLVESNTISTNSTKHDADDDNISKEKLNQTGGGYKKHASNTSDGKRGCTCKKNKCVNLYCECFRAEIYCSEACACEGCLNREEHLHKINEAKEYIKRRYPLAFAPRIVQTHLSSPNNTDNENVKTASSSSAAARHKRGCRCIKSNCMQKYCVCFEVEVGCSSLCECKECKNPYGKNKDSGH 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03456 543 ProSiteProfiles CRC domain profile. 406 536 IPR005172 -
Arst8g03456 543 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 337 540 IPR044522 GO:0003700
Arst8g03456 543 MobiDBLite consensus disorder prediction 323 348 - -
Arst8g03456 543 MobiDBLite consensus disorder prediction 373 408 - -
Arst8g03456 543 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 499 533 IPR005172 -
Arst8g03456 543 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 268 303 IPR005172 -
Arst8g03456 543 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 408 443 IPR005172 -
Arst8g03456 543 ProSiteProfiles CRC domain profile. 266 329 IPR005172 -
Arst8g03456 543 SMART CXC_2 265 306 IPR033467 -
Arst8g03456 543 SMART CXC_2 405 446 IPR033467 -
Arst8g03456 543 SMART CXC_2 496 537 IPR033467 -
Arst8g03456 543 MobiDBLite consensus disorder prediction 334 348 - -
Arst8g03456 543 MobiDBLite consensus disorder prediction 1 61 - -
Arst8g03456 543 MobiDBLite consensus disorder prediction 43 61 - -
Arst8g03456 543 MobiDBLite consensus disorder prediction 15 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03456 Arst-Chr8 45385013 45389060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03456 373 541 CPP Transcription Factor Family AT4G14770 40.230 2.65e-34 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Arst8g03456 TCR 3.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03456 K21776 - gmx:547664 170.629