Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03444 ATGAGAAGGCGTGGAAAGAAGGTATTTGCAAGATTGTGTGGTGGTATCCGTGGTGGTGACGACGACGAGGACGAAGAAGACACCTTTCCTGAGAGCCAAAGGAGGGATCACATTGCGGAGTTTGATTATGAAGGAAGCCAATACAGCCTCGCCGGTCTTCCGCTTCCCTCGCTCGGCTCCACTTCCCACAGACTCAAGCTCCGTCCTTACATTGTTTCTCCCTTCAACCACCATTACAGACTTTGGCAGACATTTCTGGTGTTCTTGGTGTTCTACAATGCATGGGTTTGTCCATTTGAATTTGCATTCCTTAACCAAAAAATGGTCGCAATCTTCATAGCTGACAATGTTGTCAATGGATTCTTTGCTGTTGACATTGTTCTCACCTTCTTTGTTGCATACCTAGACAAGACTACCTATTTGCTAGTTGATGATAAAAGCCTAATTGCTTTGAGATATGCAAAATCATGGTTGGCTTTAGATGTCATCTCCACTATCCCCTCTGAAGTTGCTCATAGGTTTTTGCCCGCTGCCCTGAAAAAATATGCTTACTTCAACATGCTTCGCCTTTGGCGTCTTCGCCGAGTCAGTGCCTTGTTTGCAAGATTAGAGAAGGACAGGCATTATAATTACTTCTGGGTTCGCTGCTCAAAACTGATCTGTGTTACATTATTCGCAGCTCATTTTGCTGCTTGCATTTTCCATTTTATCACTCTGAATCGTGAAAACGGACAAACATGGCTTTCGCTTCTTCCGGAAGTCGATGATCATAGTGTCACATCCCTCTATATAGCATCAATTTACTGGTCCATATCAACTCTTACAACGGTTGGTTATGGAGATCTACATCCTACGAACACAAGGGAGACTCTTTTTGATACTTTCTATATGCTCTTCAATCTTGGGCTAACTGCATATCTCATAGGTAACATGACAAATTTGGTCGTCCATGGGACAAGCAGAACTAGGAAATATAGAGACACAATTCAAGCTGTGACAAGTTTTGCCAAACGGAATAAATTGCCTGTTCTCATGCAAGAACAGATGATTGCACATTTGCATATGAAGTACAGAACTGATATAGAAGGGCTGCAGCAGCAAGAGATTATCGAATTACTCCCGAAAGCTATTCGTTCTAGCATCTCTCATTACCTATTCTATGAAATTTTGGAGGATATCTACTTGTTTAATGGGGTGTCACATGATCTGCTTTTTCAACTGGTCTCAGAGATGAAGCCCGAGTATTTTCCTCCAAAGGAAGATGTGATTTTGCAGAATGAAGCACCAACAGACTTCTATGTATTGGTCACTGGTGCTGTGGAAGTTATTCTCAAAGGACAGAATAGAACTGAACAGGTAGTTGGTGAGATAAAGGCAGGAGAATTAGTTGGAGAAGTCGGAGTTTTATGTTACAGGCCCCAGATGTTTACAGTTCGGACCAAACGATTGTGCCAACTTCTGCGCTTGAGCCGGACTACATTTATAAATCTTGCTCACTCCAATGTTGGAGATGGGACAATTATGATGAACAATTTTCTCAAGCATTTGCATGAATCCCAGGCACCAGGGATGGATATAATTTTCCGAGAGACAGAGGCCATGCTGGCACGTGGTAAATTGGATTTGCCTATCAGCACATGCTTTGCAGTAAACCGAAATGATGATATATTGTTGCAACGGCTGCTGAAGAAGGGTATGGATCCAAATGAAGGCGACCCAGATGGAAGGACACCGCTGCATATTGCAGCTTCTAAAGGCAATGAGAAGTGTATATCTGTGCTTCTGGAATATGATGCTGATCCCAACATCAGAGATAAGGAAGGAAATCTTCCACTGTTTGAAGCACTTATAAGTGGTAACGACTCCATTGTGAAACTCCTTCTGGAGCATGGTGCAGTATTAGAACCTGCCGATGCAGGCCACCTGGCATGCATTGCTGTTGAGAAAAATAGCATGGAACTGCTCAAAAGAATTTGTCAATATGGTTGGGATGTGACACAACCCACACACAATGGAACCACTGCTCTTCACACTGCAGTGTGTGAAGGAAACCTCCAAATGACAAAGTTCCTTGTCGAAAAAGGAGCCAACATTGATCTGCAAGACGCTACCGCTATTCCACCATCAAATCGCAAGCACTTGCCTAACCTTGGAAGGTACCAAAGTGAACCAACTATGCGTAGTATTCCCCAAACAAACATTGGACAGTTCCGCTCGCCACGCAATCCAGAAGATATGTTCTTTGACAATACTAAAAGAAGAAGAAACAACAATTTTAACAATTCCATTTTTGGGATGATGTCGGCAGCTAACCATAATCAAAGAGAGCGTGAGGCATCCAAAAAATTTAACAATAATAGGTGGAACAAGGATGACTTTGTTGGCAGAGTGACATTAAGTTGTCCTGAAAAGGGTGAACATGCTGGAAAGCTTGTTATGCTGCCAAATACCATTCAGGAACTGCTAGATATTGGAGCTAAAACGTTTGACTTTACTGCTGTCAAAATTTTGACCAAAGAAGGAGCTGAAGTGGATGATATAAATCTTATAAGAGATGGTGATCATCTTATTATTGCACATACATGA 2586 0.4234 MRRRGKKVFARLCGGIRGGDDDEDEEDTFPESQRRDHIAEFDYEGSQYSLAGLPLPSLGSTSHRLKLRPYIVSPFNHHYRLWQTFLVFLVFYNAWVCPFEFAFLNQKMVAIFIADNVVNGFFAVDIVLTFFVAYLDKTTYLLVDDKSLIALRYAKSWLALDVISTIPSEVAHRFLPAALKKYAYFNMLRLWRLRRVSALFARLEKDRHYNYFWVRCSKLICVTLFAAHFAACIFHFITLNRENGQTWLSLLPEVDDHSVTSLYIASIYWSISTLTTVGYGDLHPTNTRETLFDTFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKYRDTIQAVTSFAKRNKLPVLMQEQMIAHLHMKYRTDIEGLQQQEIIELLPKAIRSSISHYLFYEILEDIYLFNGVSHDLLFQLVSEMKPEYFPPKEDVILQNEAPTDFYVLVTGAVEVILKGQNRTEQVVGEIKAGELVGEVGVLCYRPQMFTVRTKRLCQLLRLSRTTFINLAHSNVGDGTIMMNNFLKHLHESQAPGMDIIFRETEAMLARGKLDLPISTCFAVNRNDDILLQRLLKKGMDPNEGDPDGRTPLHIAASKGNEKCISVLLEYDADPNIRDKEGNLPLFEALISGNDSIVKLLLEHGAVLEPADAGHLACIAVEKNSMELLKRICQYGWDVTQPTHNGTTALHTAVCEGNLQMTKFLVEKGANIDLQDATAIPPSNRKHLPNLGRYQSEPTMRSIPQTNIGQFRSPRNPEDMFFDNTKRRRNNNFNNSIFGMMSAANHNQREREASKKFNNNRWNKDDFVGRVTLSCPEKGEHAGKLVMLPNTIQELLDIGAKTFDFTAVKILTKEGAEVDDINLIRDGDHLIIAHT 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03444 861 Pfam Cyclic nucleotide-binding domain 414 500 IPR000595 -
Arst8g03444 861 PRINTS EAG/ELK/ERG potassium channel family signature 126 135 IPR003938 GO:0005249|GO:0006813|GO:0016020
Arst8g03444 861 PRINTS EAG/ELK/ERG potassium channel family signature 307 316 IPR003938 GO:0005249|GO:0006813|GO:0016020
Arst8g03444 861 PRINTS EAG/ELK/ERG potassium channel family signature 263 280 IPR003938 GO:0005249|GO:0006813|GO:0016020
Arst8g03444 861 PRINTS EAG/ELK/ERG potassium channel family signature 115 125 IPR003938 GO:0005249|GO:0006813|GO:0016020
Arst8g03444 861 Pfam KHA, dimerisation domain of potassium ion channel 796 858 IPR021789 -
Arst8g03444 861 ProSiteProfiles KHA domain profile. 796 861 IPR021789 -
Arst8g03444 861 Gene3D Jelly Rolls 386 531 IPR014710 -
Arst8g03444 861 ProSiteProfiles Ankyrin repeat region circular profile. 671 702 - -
Arst8g03444 861 FunFam Potassium channel KAT3 81 317 - -
Arst8g03444 861 ProSiteProfiles Ankyrin repeat profile. 671 703 IPR002110 GO:0005515
Arst8g03444 861 PANTHER POTASSIUM CHANNEL AKT1 46 858 IPR045319 GO:0005249|GO:0006813
Arst8g03444 861 Gene3D Helix hairpin bin 318 384 - -
Arst8g03444 861 ProSiteProfiles Ankyrin repeat profile. 607 639 IPR002110 GO:0005515
Arst8g03444 861 CDD CAP_ED 395 509 IPR000595 -
Arst8g03444 861 Gene3D - 80 316 - -
Arst8g03444 861 ProSiteProfiles Ankyrin repeat profile. 574 606 IPR002110 GO:0005515
Arst8g03444 861 Gene3D - 543 710 IPR036770 -
Arst8g03444 861 SMART ANK_2a 817 846 IPR002110 GO:0005515
Arst8g03444 861 SMART ANK_2a 638 667 IPR002110 GO:0005515
Arst8g03444 861 SMART ANK_2a 541 570 IPR002110 GO:0005515
Arst8g03444 861 SMART ANK_2a 574 603 IPR002110 GO:0005515
Arst8g03444 861 SMART ANK_2a 607 636 IPR002110 GO:0005515
Arst8g03444 861 SMART ANK_2a 671 700 IPR002110 GO:0005515
Arst8g03444 861 ProSiteProfiles Ankyrin repeat region circular profile. 607 632 - -
Arst8g03444 861 ProSiteProfiles cAMP/cGMP binding motif profile. 395 515 IPR000595 -
Arst8g03444 861 PRINTS Ankyrin repeat signature 575 590 IPR002110 GO:0005515
Arst8g03444 861 PRINTS Ankyrin repeat signature 687 701 IPR002110 GO:0005515
Arst8g03444 861 SUPERFAMILY Ankyrin repeat 548 703 IPR036770 -
Arst8g03444 861 Pfam Ankyrin repeats (3 copies) 548 633 IPR002110 GO:0005515
Arst8g03444 861 Pfam Ankyrin repeats (3 copies) 645 702 IPR002110 GO:0005515
Arst8g03444 861 SUPERFAMILY Voltage-gated potassium channels 74 316 - -
Arst8g03444 861 FunFam Potassium channel KAT2 383 520 - -
Arst8g03444 861 Pfam Ion transport protein 80 322 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Arst8g03444 861 SUPERFAMILY cAMP-binding domain-like 320 516 IPR018490 -
Arst8g03444 861 ProSiteProfiles Ankyrin repeat region circular profile. 574 606 - -
Arst8g03444 861 SMART cnmp_10 395 513 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03444 Arst-Chr8 45295046 45300941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03444 31 859 Ion Channels AT2G25600 53.846 0.0 901
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03444 K21867 - gmx:100802964 1083.55