Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03408 ATGGGTTCCTCCAGAGATGCCTTCCAAATGGTCCCTGAGTCCTTTCAAAACTCTCATTTGATGAAGGTCCTTCGTAGTGCTGCCGGAGGAGAGAAGCTTAGAAGGCCAAATGATGATGAAGTGTTGCTCGGTATGCAGTCGCTGAAGCCAATGTCTGCTTCTCTATTTCAGCCTCCTACAAGTTCCAAGCTTGATGCCAATAAATGGGAACGATCTTTACTCATGAATGTTGGCCCTTCCATGCAGCATCCCCCACGTGGAGGTCAACTGACGCCGTTTGTACACCAAATAGCCTCAAACAAAATGAGGGATGCCAATGCCGGTCCTTCATTTATTTCTCAGTCAGCTGCTGATGAAGGATCTAGAACAGGAATTAAGGGCCCTGGCATTTTAAGTTCCATAAACCCAACTGCTTTGGGCATTGAGAAATCATCATCTGCAGGGTTTCTTGGTGGAAGCAGGACAAAGACTGTAAGTAATGTAGTGGACCCCGAATCATCGACACTTCCAAGTCAACATGGCCAAAAATCTTCCAGCCGCCAGATGACTATATTTTACGGGGGTCAGGCTCATGTTTTCGATGATGTCCACCCTCACAAGCTGGAAAAAAGCTCTGTGGCAATCATTGATTCAACTCTGCTTAAGTTTTGGCACCCAGATGGAAGATCACTATTCAGTATTTTCTATTTGAACAGTTATCCTAACCTTTTTCTGGCAGATGTTATAATGTCTTTAGCCGGATCAAATGGCGGATCATGGTCAACTGCATTCTCGCCGAAATCTTCTGTAAAGCTGGCGAATGATAGTAACTTGCATAGTGGAGAGAACGACACGGGTATCCCACATGATCTTCACGGGAGGTTGCCTATTACTGGAAGTTCTAGCCATGCCATTGTGCCTGGTGATCGAATATCTACTCCGGCAGTTGTAGTGGCAAACCAGGGAAGCATTGTATCTAAACATACAAGAAATCCTGTTCAAGCATCTGAACCCAGATCTGAAGACAAAAAAAGAGCACAATGA 1023 0.4516 MGSSRDAFQMVPESFQNSHLMKVLRSAAGGEKLRRPNDDEVLLGMQSLKPMSASLFQPPTSSKLDANKWERSLLMNVGPSMQHPPRGGQLTPFVHQIASNKMRDANAGPSFISQSAADEGSRTGIKGPGILSSINPTALGIEKSSSAGFLGGSRTKTVSNVVDPESSTLPSQHGQKSSSRQMTIFYGGQAHVFDDVHPHKLEKSSVAIIDSTLLKFWHPDGRSLFSIFYLNSYPNLFLADVIMSLAGSNGGSWSTAFSPKSSVKLANDSNLHSGENDTGIPHDLHGRLPITGSSSHAIVPGDRISTPAVVVANQGSIVSKHTRNPVQASEPRSEDKKRAQ 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03408 340 Pfam tify domain 177 200 IPR010399 -
Arst8g03408 340 MobiDBLite consensus disorder prediction 315 340 - -
Arst8g03408 340 ProSiteProfiles Tify domain profile. 175 210 IPR010399 -
Arst8g03408 340 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 52 282 IPR040390 -
Arst8g03408 340 SMART tify_2 175 203 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03408 Arst-Chr8 44906879 44913633 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03408 72 202 Tify Gene Family AT4G32570 46.715 1.30e-28 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Arst8g03408 tify 1.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03408 - - ahf:112707837 677.937