Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03407 ATGGCACAGCCACAGCCACAGCCACAGCAACACCACCATCATCACAACAACAACAATGGCGGTGGTAGCACCACCCAAAAACAACACCACCATGTTCTCCATGACTTTCTCGGCATGAAGCCCAACAACGATATACGCCTCTCTACTGACCTCTCACCTTCCTCTTCCTCCGCCGCTGCACGCGGCCCCTTCTCCTCCTCCGCCGCCTCCGACATCGCTTCCGAAAAACAGGTAGGGAATCATCTTGAAGGGGTTCCATACTATGGTCCACGAAGTGATTTTTCTGGCACCGAGATAAGCAACAGATTAGTGGGAAACAAGAGAAGCAATTCTGATTCTACTTTTATGGGTTCCTCCAGAGATGCCTTCCAAATGGTCCCTGAGTCCTTTCAAAACTCTCATTTGATGAAGGTCCTTCGTAGTGCTGCCGGAGGAGAGAAGCTTAGAAGGCCAAATGATGATGAAGTGTTGCTCGGTATGCAGTCGCTGAAGCCAATGTCTGCTTCTCTATTTCAGCCTCCTACAAGTTCCAAGCTTGATGCCAATAAATGGGAACGATCTTTACTCATGAATGTTGGCCCTTCCATGCAGCATCCCCCACGTGGAGGTCAACTGACGCCGTTTGTACACCAAATAGCCTCAAACAAAATGAGGGATGCCAATGCCGGTCCTTCATTTATTTCTCAGTCAGCTGCTGATGAAGGATCTAGAACAGGAATTAAGGGCCCTGGCATTTTAAGTTCCATAAACCCAACTGCTTTGGGCATTGAGAAATCATCATCTGCAGGGTTTCTTGGTGGAAGCAGGACAAAGACTGTAAGTAATGTAGTGGACCCCGAATCATCGACACTTCCAAGTCAACATGGCCAAAAATCTTCCAGCCGCCAGATGACTATATTTTACGGGGGTCAGGCTCATGTTTTCGATGATGTCCACCCTCACAAGGCAGATGTTATAATGTCTTTAGCCGGATCAAATGGCGGATCATGGTCAACTGCATTCTCGCCGAAATCTTCTGTAAAGCTGGCGAATGATAGTAACTTGCATAGTGGAGAGAACGACACGGGTATCCCACATGATCTTCACGGGAGGTTGCCTATTACTGGAAGTTCTAGCCATGCCATTGTGCCTGGTGATCGAATATCTACTCCGGCAGTGGCAAACCAGGGAAGCATTGTATCTAAACATACAAGAAATCCTGTTCAAGCATCTGAACCCAGATCTGAAGACAAAAAAAGAGCACAATGA 1248 0.4768 MAQPQPQPQQHHHHHNNNNGGGSTTQKQHHHVLHDFLGMKPNNDIRLSTDLSPSSSSAAARGPFSSSAASDIASEKQVGNHLEGVPYYGPRSDFSGTEISNRLVGNKRSNSDSTFMGSSRDAFQMVPESFQNSHLMKVLRSAAGGEKLRRPNDDEVLLGMQSLKPMSASLFQPPTSSKLDANKWERSLLMNVGPSMQHPPRGGQLTPFVHQIASNKMRDANAGPSFISQSAADEGSRTGIKGPGILSSINPTALGIEKSSSAGFLGGSRTKTVSNVVDPESSTLPSQHGQKSSSRQMTIFYGGQAHVFDDVHPHKADVIMSLAGSNGGSWSTAFSPKSSVKLANDSNLHSGENDTGIPHDLHGRLPITGSSSHAIVPGDRISTPAVANQGSIVSKHTRNPVQASEPRSEDKKRAQ 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03407 415 MobiDBLite consensus disorder prediction 384 401 - -
Arst8g03407 415 MobiDBLite consensus disorder prediction 344 415 - -
Arst8g03407 415 MobiDBLite consensus disorder prediction 1 27 - -
Arst8g03407 415 ProSiteProfiles Tify domain profile. 290 325 IPR010399 -
Arst8g03407 415 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 94 365 IPR040390 -
Arst8g03407 415 SMART tify_2 290 325 IPR010399 -
Arst8g03407 415 MobiDBLite consensus disorder prediction 45 72 - -
Arst8g03407 415 Pfam tify domain 292 324 IPR010399 -
Arst8g03407 415 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03407 Arst-Chr8 44906700 44913633 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03407 27 323 Tify Gene Family AT4G32570 38.994 1.74e-48 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Arst8g03407 tify 1e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03407 - - ahf:112707837 764.607