Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03404 ATGGCACAGCCACAGCCACAGCCACAGCAACACCACCATCATCACAACAACAACAATGGCGGTGGTAGCACCACCCAAAAACAACACCACCATGTTCTCCATGACTTTCTCGGCATGAAGCCCAACAACGATATACGCCTCTCTACTGACCTCTCACCTTCCTCTTCCTCCGCCGCTGCACGCGGCCCCTTCTCCTCCTCCGCCGCCTCCGACATCGCTTCCGAAAAACAGGTAGGGAATCATCTTGAAGGGGTTCCATACTATGGTCCACGAAGTGATTTTTCTGGCACCGAGATAAGCAACAGATTAGTGGGAAACAAGAGAAGCAATTCTGATTCTACTTTTATGGGTTCCTCCAGAGATGCCTTCCAAATGGTCCCTGAGTCCTTTCAAAACTCTCATTTGATGAAGGTCCTTCGTAGTGCTGCCGGAGGAGAGAAGCTTAGAAGGCCAAATGATGATGAAGTGTTGCTCGGTATGCAGTCGCTGAAGCCAATGTCTGCTTCTCTATTTCAGCCTCCTACAAGTTCCAAGCTTGATGCCAATAAATGGGAACGATCTTTACTCATGAATGTTGGCCCTTCCATGCAGCATCCCCCACGTGGAGGTCAACTGACGCCGTTTGTACACCAAATAGCCTCAAACAAAATGAGGGATGCCAATGCCGGTCCTTCATTTATTTCTCAGTCAGCTGCTGATGAAGGATCTAGAACAGGAATTAAGGGCCCTGGCATTTTAAGTTCCATAAACCCAACTGCTTTGGGCATTGAGAAATCATCATCTGCAGGGTTTCTTGGTGGAAGCAGGACAAAGACTGTAAGTAATGTAGTGGACCCCGAATCATCGACACTTCCAAGTCAACATGGCCAAAAATCTTCCAGCCGCCAGATGACTATATTTTACGGGGGTCAGGCTCATGTTTTCGATGATGTCCACCCTCACAAGCTGGAAAAAAGCTCTGTGGCAATCATTGATTCAACTCTGCTTAAGTTTTGGCACCCAGATGGAAGATCACTATTCAGTATTTTCTATTTGAACAGTTATCCTAACCTTTTTCTGGCAGATGTTATAATGTCTTTAGCCGGATCAAATGGCGGATCATGGTCAACTGCATTCTCGCCGAAATCTTCTGTAAAGCTGGCGAATGATAGTAACTTGCATAGTGGAGAGAACGACACGGGTATCCCACATGATCTTCACGGGAGGTTGCCTATTACTGGAAGTTCTAGCCATGCCATTGTGCCTGGTGATCGAATATCTACTCCGGCAGTGGCAAACCAGGGAAGCATTGTATCTAAACATACAAGAAATCCTGTTCAAGCATCTGAACCCAGATCTGAAGACAAAAAAAGAGCACAATGA 1362 0.4677 MAQPQPQPQQHHHHHNNNNGGGSTTQKQHHHVLHDFLGMKPNNDIRLSTDLSPSSSSAAARGPFSSSAASDIASEKQVGNHLEGVPYYGPRSDFSGTEISNRLVGNKRSNSDSTFMGSSRDAFQMVPESFQNSHLMKVLRSAAGGEKLRRPNDDEVLLGMQSLKPMSASLFQPPTSSKLDANKWERSLLMNVGPSMQHPPRGGQLTPFVHQIASNKMRDANAGPSFISQSAADEGSRTGIKGPGILSSINPTALGIEKSSSAGFLGGSRTKTVSNVVDPESSTLPSQHGQKSSSRQMTIFYGGQAHVFDDVHPHKLEKSSVAIIDSTLLKFWHPDGRSLFSIFYLNSYPNLFLADVIMSLAGSNGGSWSTAFSPKSSVKLANDSNLHSGENDTGIPHDLHGRLPITGSSSHAIVPGDRISTPAVANQGSIVSKHTRNPVQASEPRSEDKKRAQ 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03404 453 ProSiteProfiles Tify domain profile. 290 325 IPR010399 -
Arst8g03404 453 Pfam tify domain 292 315 IPR010399 -
Arst8g03404 453 MobiDBLite consensus disorder prediction 1 27 - -
Arst8g03404 453 MobiDBLite consensus disorder prediction 422 439 - -
Arst8g03404 453 MobiDBLite consensus disorder prediction 383 453 - -
Arst8g03404 453 SMART tify_2 290 318 IPR010399 -
Arst8g03404 453 MobiDBLite consensus disorder prediction 45 72 - -
Arst8g03404 453 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 94 401 IPR040390 -
Arst8g03404 453 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03404 Arst-Chr8 44906699 44913633 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03404 27 317 Tify Gene Family AT4G32570 37.500 8.34e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Arst8g03404 tify 2.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03404 - - ahf:112707837 859.751