Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03396 ATGGTAGAATCACATGACACCACTGGTGAACATTGTATGTCCAATAGCATAAGAGAACATGGTATAGCAGACAACGTGCTTTCGGTGCAAGACACTGCGAAATCTGATGGTCCGAGCTCTCCAAATAAAGACATAGATATGATTTGTGAGAAACTAGGAGCATCAGATTGCTTGGCCATTGTGGACATTGATTCCGAGATAAAGGATCCTGAAGTTTGGAGTTCTTATGCACCTGAAATATACAATAATATTCGTGTCACAGAGCTCTCAAGAAGACCAATATCGAATTACATGGGAGAGTTGCAGCAAGATATCAGTCCTACCATGAGGGGAATTTTGATTGATTGGCTTGTGGAGGTTACCGAGGAATATAACTTGGTTCCAGACACACTTTACCTTACAGTAAACCTCATTGATAGGTATCTCTCAGCAAAATTGATGCAGAAACAAAGACTCCAGTTGCTTGGTGTTACTTGCATGCTCATTGCATCAAAGTATGAAGAGATTTGTGCTCCTAGAGTGGAGGAATTTTGCTTCATCACAGATAACACTTACACAAAAGAAGAGGTATTGAAAATGGAGAGTGAAGTTCTAAACATTTTGCATTTTCATTTATCTGTTCCAACAACCAAAACATTTCTGAGGAGATTCATCCAAGCAGCACAATCTTCATACAAGGTTCCTCACATCGAATTGGAATTCCTGGCAAATTATTTAGCAGAGCTTACCCTTGTTGAGTACAGTTTCTTGCAGTTTCTACCTTCCCTTATAGCTGCATCTGCTGTGTTCCTTGCAAGATGGACTTTAAACCAATCAGAACATCCATGGAATCTAACTCTGGAGTACTATACAAACTACAAAGCCTCAGAGCTTGAAACTGTTGTTCTTGCACTTGTAGATTTGCAGCTCAACACCAAAGCCAGTTCCTTGAATGCTATACGTGAAAAGTATAAACAACATAAGTTCAATTGTGTGGCAACACTGTCTCCAAATCCAAAACCAGTGCAATCGCTCTTCCAAGTTTCAAGTGTAAATTAA 1038 0.396 MVESHDTTGEHCMSNSIREHGIADNVLSVQDTAKSDGPSSPNKDIDMICEKLGASDCLAIVDIDSEIKDPEVWSSYAPEIYNNIRVTELSRRPISNYMGELQQDISPTMRGILIDWLVEVTEEYNLVPDTLYLTVNLIDRYLSAKLMQKQRLQLLGVTCMLIASKYEEICAPRVEEFCFITDNTYTKEEVLKMESEVLNILHFHLSVPTTKTFLRRFIQAAQSSYKVPHIELEFLANYLAELTLVEYSFLQFLPSLIAASAVFLARWTLNQSEHPWNLTLEYYTNYKASELETVVLALVDLQLNTKASSLNAIREKYKQHKFNCVATLSPNPKPVQSLFQVSSVN 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03396 345 Gene3D - 93 206 - -
Arst8g03396 345 SMART Cyclin_C_2 208 331 IPR004367 -
Arst8g03396 345 Pfam Cyclin, C-terminal domain 208 330 IPR004367 -
Arst8g03396 345 CDD CYCLIN_AtCycA-like_rpt2 208 322 - -
Arst8g03396 345 ProSitePatterns Cyclins signature. 110 141 IPR006671 -
Arst8g03396 345 Gene3D - 79 327 - -
Arst8g03396 345 SUPERFAMILY Cyclin-like 69 205 IPR036915 -
Arst8g03396 345 PANTHER CYCLINS 62 323 IPR039361 -
Arst8g03396 345 FunFam Cyclin A1 195 327 - -
Arst8g03396 345 Pfam Cyclin, N-terminal domain 79 205 IPR006671 -
Arst8g03396 345 FunFam Mitotic cyclin 6 93 193 - -
Arst8g03396 345 SMART cyclin_7 212 300 IPR013763 -
Arst8g03396 345 SMART cyclin_7 115 199 IPR013763 -
Arst8g03396 345 PIRSF Cyclin_A_B_D_E 13 343 IPR046965 GO:0016538|GO:0044772
Arst8g03396 345 SUPERFAMILY Cyclin-like 207 330 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03396 Arst-Chr8 44793998 44860101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03396 22 339 Core Cell Cycle Gene Families AT5G25380 63.323 5.62e-143 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03396 K06627 - gmx:547780 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g03396 8 44793998 44860101 Arst8g03396 8 44793998 44860101 ECH