Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03369 ATGAGTGAGAAAAGGGCCGTGGTGCTGCTGCATGCAGAAAAAGCGTTCGGTAAAGACAGATCGGAACAGAAGTGGTTTGCATATGTTGTTATGGAGGAGGCGATAATAATGTACTCATCCGAGGGAAAAGTGTACAATCTGTCATCAAACACAGAAAGCATGCACGGAGAAGAATTGGTTCAATCAAAAGAACATGAAAAGATCAATGACTTGCAAGAGAGAGGATATATGAAATACGGATGTCAACATTATCGGAGAAGATGTCGTATTAGGGCCCCCTGCTGCAATGAGATTTTTCACTGTCGCCATTGTCATAATGAGGCAAAGGATGATATCAAGATTGATCCAAAGCTTAGACATGACCTTTCCCGTCATCAAATTAAACAGGTGATATGTTTACTTTGCGGGACTGAACAAGAGGTTCAGCAAAACTGCATTAGTTGTGGAGTTTGTATGGGGAAGTACTTTTGCGGGATATGCAAGCTTTTTGATGACGATGTATCTAAGAAACAATACCATTGCGGCGGCTGTGGAATTTGCAGAACTGGAGGATCTGAAAATTTCTTCCACTGCGACAAGTGTGGTTGTTGCCAGTCTACTCTGCTGAAAAATAGTCACGCTTGTGTGGAGAAGGCAATGCATCATGATTGTCCTGTTTGTTTTGAGTATTTGTTCGAATCGATGGATGAAATCGCTGTCTTGCCATGTGGACATACAATCCATATCAACTGTATGAATGAAATGAGAAAGCATTTACAGTATGCATGCCCTCTTTGCTCAAAGTCAGTTTGTGATATGTCAAAGGTTTGGGAGAAGTTTGACTTGGAGATTGCTGCTACACCAATGCCTGAACAATATCAAAATAAAATGGTTTGGATCCTTTGCAATGATTGTGGTAAAAGTAGTAACGTAAAGTACCATATTATTGCTCAAAAGTGCTTGAATTGCAACTCCTACAACACAAGACAAACTTGA 975 0.4051 MSEKRAVVLLHAEKAFGKDRSEQKWFAYVVMEEAIIMYSSEGKVYNLSSNTESMHGEELVQSKEHEKINDLQERGYMKYGCQHYRRRCRIRAPCCNEIFHCRHCHNEAKDDIKIDPKLRHDLSRHQIKQVICLLCGTEQEVQQNCISCGVCMGKYFCGICKLFDDDVSKKQYHCGGCGICRTGGSENFFHCDKCGCCQSTLLKNSHACVEKAMHHDCPVCFEYLFESMDEIAVLPCGHTIHINCMNEMRKHLQYACPLCSKSVCDMSKVWEKFDLEIAATPMPEQYQNKMVWILCNDCGKSSNVKYHIIAQKCLNCNSYNTRQT 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03369 324 Pfam Zinc-ribbon 264 322 IPR039512 -
Arst8g03369 324 SUPERFAMILY CHY zinc finger-like 78 152 IPR037274 GO:0008270
Arst8g03369 324 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 210 262 IPR013083 -
Arst8g03369 324 SUPERFAMILY Zinc hairpin stack 153 210 IPR037275 -
Arst8g03369 324 Pfam CHY zinc finger 81 162 IPR008913 GO:0008270
Arst8g03369 324 CDD RING-H2_Pirh2-like 216 260 - -
Arst8g03369 324 ProSiteProfiles Zinc finger RING-type profile. 217 260 IPR001841 -
Arst8g03369 324 ProSiteProfiles Zinc finger CTCHY-type profile. 152 216 IPR017921 -
Arst8g03369 324 Gene3D - 288 324 - -
Arst8g03369 324 SUPERFAMILY RING/U-box 216 265 - -
Arst8g03369 324 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 54 324 - -
Arst8g03369 324 ProSiteProfiles Zinc finger CHY-type profile. 74 150 IPR008913 GO:0008270
Arst8g03369 324 SMART ring_2 217 259 IPR001841 -
Arst8g03369 324 Pfam Ring finger domain 216 259 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03369 Arst-Chr8 44609036 44615358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03369 79 322 C2H2 Transcription Factor Family AT3G18290 40.000 2.62e-56 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03369 K10144 - gmx:100803569 527.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g03369 8 44609036 44615358 Arst8g03369 8 44609036 44615358 ECH
Arst6g03595 6 103772568 103777993 Arst8g03369 8 44609036 44615358 PCT