Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03347 ATGAAGAGGTCTCCTAATTCCTCTTCTTCATCTTCATCATCTTCTGTTGGTGTTGGTTTTGAATTAAAGATTAATAATAACGATAAGTATCCAAGAAGCAAAAATAGCAGTAATAATGTGAAGTTATCACAGAAAAAAGTATTGAAGAAAACAAATAGCTATGACAATAGCAGTGTCAACAAAAGAAGCTCCATTTACAGAGGAGTCACCAGGCATAGGTGGACAGGGAGGTTTGAAGCTCATCTGTGGGACAAGAATTCTTGGAATAATATTCAGAGTAAGAAGGGACGACAAGTTTATTTAGGGGCATACAATACAGAAGAAGCTGCTGCTCGCTCCTATGATCTTGCTGCTCTAAAGTATTGGGGACCTAATACAATCTTAAATTTTCCGATGGAAACATATGCCAAGGAAATTGAGGAAATGAAGGATGTTTCACAGACTGAATACTTGGCTTCTCTGCGAAGAAGGAGCAGTGGATTTTCAAGAGGTGTTTCCAAGTATCGTGGAGTGGCTAGGCATCACCACAATGGAAGGTGGGAAGCACGAATTGGAAGAGTAAACGGCAACAAGTACCTTTATCTGGGGACCTATAACACTCAAGAAGAGGCGGCAGCAGCATATGATAGAGCAGCTATCGAGTACAGAGGAATAAATGCAGTAACAAATTTTGATATAAGCAATTATATTGACAAAATAAAGAAGAATGAGCCGTCTATGAAAGAAGCACAAACACATATAACTCCAATCTCTACTGAATCTAAAGAAGCACAAGTAGTGGAGCAGGAGGCTCCTTCCACAGTAGTGGCAGATCCAGCAAATTTAGGTAACCAGAAAAAAGAAAATATGCAGAAGAAAAAAGAGCAGCCAAACACAGATATCGATGGCATACTTTCTCGGGATCTGAGATGGAGCTTCATGGATGCCGAATTATCCGAGTTCAACATGAATGATATTTTTCAAGGTGAAGGTAGTGGGTTGGAGGATGACATCAACCTTATGTGTATGGCTGATCCTGATGAGAGTAGTTTCAATCTGAACACTATCTTTGATGATCCTGGAAAATGTGGTGGAGATATGCATGTCTATGCCAATTATTAA 1101 0.3951 MKRSPNSSSSSSSSSVGVGFELKINNNDKYPRSKNSSNNVKLSQKKVLKKTNSYDNSSVNKRSSIYRGVTRHRWTGRFEAHLWDKNSWNNIQSKKGRQVYLGAYNTEEAAARSYDLAALKYWGPNTILNFPMETYAKEIEEMKDVSQTEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVNGNKYLYLGTYNTQEEAAAAYDRAAIEYRGINAVTNFDISNYIDKIKKNEPSMKEAQTHITPISTESKEAQVVEQEAPSTVVADPANLGNQKKENMQKKKEQPNTDIDGILSRDLRWSFMDAELSEFNMNDIFQGEGSGLEDDINLMCMADPDESSFNLNTIFDDPGKCGGDMHVYANY 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03347 366 Gene3D AP2/ERF domain 65 133 IPR036955 GO:0003700|GO:0006355
Arst8g03347 366 Gene3D AP2/ERF domain 166 227 IPR036955 GO:0003700|GO:0006355
Arst8g03347 366 MobiDBLite consensus disorder prediction 29 55 - -
Arst8g03347 366 SUPERFAMILY DNA-binding domain 166 227 IPR016177 GO:0003677
Arst8g03347 366 Pfam AP2 domain 65 123 IPR001471 GO:0003700|GO:0006355
Arst8g03347 366 Pfam AP2 domain 166 217 IPR001471 GO:0003700|GO:0006355
Arst8g03347 366 CDD AP2 64 131 IPR001471 GO:0003700|GO:0006355
Arst8g03347 366 ProSiteProfiles AP2/ERF domain profile. 167 225 IPR001471 GO:0003700|GO:0006355
Arst8g03347 366 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 35 277 - -
Arst8g03347 366 FunFam AP2-like ethylene-responsive transcription factor 64 133 - -
Arst8g03347 366 CDD AP2 166 227 IPR001471 GO:0003700|GO:0006355
Arst8g03347 366 SMART rav1_2 65 137 IPR001471 GO:0003700|GO:0006355
Arst8g03347 366 SMART rav1_2 167 231 IPR001471 GO:0003700|GO:0006355
Arst8g03347 366 FunFam AP2-like ethylene-responsive transcription factor 166 227 - -
Arst8g03347 366 MobiDBLite consensus disorder prediction 25 55 - -
Arst8g03347 366 MobiDBLite consensus disorder prediction 272 291 - -
Arst8g03347 366 SUPERFAMILY DNA-binding domain 64 133 IPR016177 GO:0003677
Arst8g03347 366 PRINTS Ethylene responsive element binding protein signature 207 227 IPR001471 GO:0003700|GO:0006355
Arst8g03347 366 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Arst8g03347 366 ProSiteProfiles AP2/ERF domain profile. 65 131 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03347 Arst-Chr8 44399890 44409648 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03347 161 235 AP2-EREBP Transcription Factor Family AT5G57390 39.759 2.58e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Arst8g03347 AP2 4.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03347 - - aip:107641803 605.134