Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03305 ATGGCAGTGGAGTTAATGGGATTCCCAAAAATGGACGACCCAAATAACAAAGCCATACAAGAAGCAGCATCCGAGGGCATAAAGGGAATGGAGCACCTCGTTCGCCTTCTTTCAAACCCTTCGCAAAACGACACCACTGACCTCACAAACGTCACCGTTTCCAAGTTCCGCAAACTCATTTCCTTACTTAACCGCACCGGCCGCGCCCGCTTCCGCCGTGCACCAATTTCAAATTCCTCAGACTCTTTAACCTTCTCTCCGGCGACCTTCACTCCTCCCCCGCCGCCGCCGCACTCACAGCCACAGCCACTGCCACTGCCACAGCCACAGCCGCTTGCGGTTGCTCCGGTCACCGTCCACCACCCTTCTCCTCTTCTTCCGCCGCAGACTCTCACTCTTGACTTCACCAAACCTAACAACAGCTTCCTCACCAACGTATCCAACAACGCCGGAACCAAATCCATGGAGCTGGAGTTCTCGAAGGACACGACGACGTTTAGCGTCTCGTCGAACTCGTCGTTTATGTCCTCCGCCATCACCGGCGACGGCAGCGTCTCCAACGGCAAGCTCGGAACCTCGATCTTCCTCAACCCTGCCGGGAAATTGCCTCTCTCGTCGTCGGCGCCGGCTCCGGCTCCGGTCAAGAAAAGGTGTCACGACCACCACTCCGACGATGTATCCGGCAAGGTCTCCGGTTCTTCCAGCAAGTGCCACTGCATCAAGCGAAGGAAAAATAGGGTTAAGAAGACGATAAGAGTGCCGGCAATTAGTTCAAAGATAGCTGATATTCCGGCGGACGAGTATTCATGGAGGAAGTACGGTCAGAAACCGATCAAAGGGTCGCCGTACCCAAGGGGTTATTATAAGTGCAGTACTGTGAGAGGGTGTCCGGCGAGGAAACACGTGGAGCGCGCACCAGATGATCCATCTATGCTGATCGTGACGTACGAAGGGGAGCACCGTCACTCCATTCAGACCGCGATGCAGGATAACATTTCTTCTGCGGGAGTGGGTTTGGTATTCGGGTCAACGTAA 1035 0.5488 MAVELMGFPKMDDPNNKAIQEAASEGIKGMEHLVRLLSNPSQNDTTDLTNVTVSKFRKLISLLNRTGRARFRRAPISNSSDSLTFSPATFTPPPPPPHSQPQPLPLPQPQPLAVAPVTVHHPSPLLPPQTLTLDFTKPNNSFLTNVSNNAGTKSMELEFSKDTTTFSVSSNSSFMSSAITGDGSVSNGKLGTSIFLNPAGKLPLSSSAPAPAPVKKRCHDHHSDDVSGKVSGSSSKCHCIKRRKNRVKKTIRVPAISSKIADIPADEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDDPSMLIVTYEGEHRHSIQTAMQDNISSAGVGLVFGST 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03305 344 Pfam WRKY DNA -binding domain 266 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst8g03305 344 MobiDBLite consensus disorder prediction 88 111 - -
Arst8g03305 344 FunFam WRKY transcription factor 65 248 325 - -
Arst8g03305 344 ProSiteProfiles WRKY domain profile. 259 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst8g03305 344 MobiDBLite consensus disorder prediction 73 87 - -
Arst8g03305 344 MobiDBLite consensus disorder prediction 206 229 - -
Arst8g03305 344 Gene3D WRKY domain 249 324 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst8g03305 344 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 19 327 IPR044810 GO:0003700
Arst8g03305 344 Pfam Plant zinc cluster domain 215 262 IPR018872 -
Arst8g03305 344 SUPERFAMILY WRKY DNA-binding domain 262 324 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst8g03305 344 SMART WRKY_cls 264 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst8g03305 344 MobiDBLite consensus disorder prediction 73 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03305 Arst-Chr8 44094369 44096713 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03305 1 343 WRKY Transcription Factor Family AT2G24570 53.693 7.75e-110 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Arst8g03305 WRKY 5.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03305 - - gmx:100127394 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g03305 8 44094369 44096713 Arst8g03305 8 44094369 44096713 ECH