Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03287 ATGAATCTCCCTTCTCTCACTTACTTCCCTCAGAAACTTGTTCCTCCTCTCTGCTCTGCTCTTACCAACTCCACCAGAAGCAGTGGTACTGCTGATAATATTGCTATTGAAGGTTGCAATTTGAAGTTCTCATTCACAGCAACGAGGCAAGCAAAGGTCGTGCCTGTGCTTAGGGATTGTTCGTTGCGCATTCCTTCTGGGCAGTTTTGGATGCTTCTTGGACCAAATGGGTGTGGAAAATCTACCCTCTTAAAGATTTTGGCTGGTCTATTGAATCCAACTTCAGGAATAGTGCATGTGAATGAACCTAAGAGTTTTGTTTTTCAAAATCCTGACCATCAGGTGGTGATGCCAACTGTAGACGCCGATGTTGCATTTGGTCTTGGTAAGTTCAGCTTGACTAATGATGAAGTAAGGTCTAGGGTGTCGAGAGCCTTGCATGCTGTAGGCCTCTCTGACTACGAGAAGAGATCTGTCCAAACTCTGAGTGGTGGTCAGAAGCAGAGGGTTGCAATTGCCGGTGCTTTAGCAGAAGCTTGTAAAGTTCTCTTGTTGGATGAGCTCACAACATTCTTAGATGAAACTGACCAGGTCGGGGTTATCAAGGCTGTTAGAAACTCTTTGGATACATCTGCAGAAGTTACAGCATTATGGGTGACCCATCGTTTGGAAGAACTAGAATATGCAGATGGTGCCATATACATGGAGGATGGGAAAGTTGTCAAATATGGAGATGCAGCTAGCATTAGGAGTTTCATTGAAGCCAAGCAATCTGAATATCTTTCAAATGCATATTAG 798 0.4398 MNLPSLTYFPQKLVPPLCSALTNSTRSSGTADNIAIEGCNLKFSFTATRQAKVVPVLRDCSLRIPSGQFWMLLGPNGCGKSTLLKILAGLLNPTSGIVHVNEPKSFVFQNPDHQVVMPTVDADVAFGLGKFSLTNDEVRSRVSRALHAVGLSDYEKRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDETDQVGVIKAVRNSLDTSAEVTALWVTHRLEELEYADGAIYMEDGKVVKYGDAASIRSFIEAKQSEYLSNAY 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03287 265 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 36 251 - -
Arst8g03287 265 SMART AAA_5 66 239 IPR003593 GO:0016887
Arst8g03287 265 CDD ABC_cobalt_CbiO_domain1 43 239 IPR015856 GO:0005524|GO:0016020|GO:0055085
Arst8g03287 265 Pfam ABC transporter 57 189 IPR003439 GO:0005524
Arst8g03287 265 ProSitePatterns ABC transporters family signature. 162 176 IPR017871 GO:0005524|GO:0016887
Arst8g03287 265 Gene3D - 23 263 IPR027417 -
Arst8g03287 265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 254 IPR027417 -
Arst8g03287 265 FunFam ABC transporter I family member 10 32 263 - -
Arst8g03287 265 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 36 262 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03287 Arst-Chr8 43954787 43961995 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03287 54 244 Calmodulin-binding Proteins AT2G36910 30.144 7.86e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03287 - - gmx:100813654 414.461