Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03268 ATGGTAGCTTGTGCTTCTATGCAAGATAACGGAAACTTTGTTCTTAAAGACAAAGACGGTAATATAGTTTGGGAGAGTTTCGAAGAACCAAGCGACACGCTTCTCCCCGGTCAGAATTTTTCCAAGTCTCAACCATTCAATTTGCAAGCTCGTCAATCGGAAACAAATTTCTCAGCTAGCAATAACTTCAATCTCAGCTGGCAACCCGATGGCAATTTGGTACTTTACTATTCTCAAAATCACCAAGAAGATGAACAGACGCAGAATTATGCATACTGGGCAACCGGAACTGACGGTCGCGGATCGCGTTTATTCTTCGATGAGTTCGGACGGATTTACGTTACGGATGATAATAACACGGAGCTGGTCCAAGTAACAAACGGGAACCCAAGTTCAACTCAATATTTTTACATGGCGAGAATTGAATCTGATGGAGTCTTCAGGCTGTACGATTATTACCAGAAGACGAACGAGGAGGATAACTGTTCTTCTGGATGGAAAGAGTTGGAACGAGAACCTGATGATATATGTGTTCTTAACATAGCTCAGAATGAAAATTTTATCTGTGGGCTTAACAGTTATTGTGTTTCCACAAATGGAAAGCCTCAATGCATGTGTCCGGATAATTATTCCTATTTTGTGCAGCCTAATGATCCAAACAACTTAACAAGTTGTAGGCCGGATTTTCCGCCTCCCAGCTGTCTGGTCAACGGCTGGGAGACGGATCCGGCCAAGGTGGATTTCCAAGAACGGCCGAATTTGAACTGGCCTTTCTCCGATTACGAGTTGGTGAGCGGTGATTTCGATAAGTACACGTGTCGAGAAAGGTGCGGTGGCGATTGCTTCTGTGCTGCGGCTGTATACAACGTTGATAAGGACAACGTGGCACATTGTTGGAAGAAGAAGTACCCTTTGAGTAATGGAAGGTCTAGTACGAAAGCCGAAAATGGAACAATAGTGTTCCTCAAGTTTCGCAAGGCAGGGTCTGGTAACCAACATCGATCTTATTTAACACTTATATTGTCATTTCTTCTTGGGAGCTCGGTTTTCCTCAACATTCTGTTGGTGTTGGGAATTCTTGGAATTTACATGTTCTTGCGCAAGAGAAAGATGTTAGGGCAGCAACTGGTTGCGAGCATGGCGCCGGAGACGGTTAGAAGCTACACATACAAAGAGCTTGAGAAGGCGACACGTGGATTCAAACAGAGATTGGGTCAAGGTGCTTTTGGAACTGTGTATAAAGGGGTATTAGAATTAGGGTCTAATACGAAAAGATATGTAGCTATTAAAAAGTTAGATAAGGTGGTTGAAGAAGGTGAAAATGAATTCAAAACAGAGGTGAGTGTGATAGGCCAAACCCACCACCGGAATTTGGTTCGCTTGCTTGGTTACTGCGACGAAGGGGAGCATCGTCTTCTTGTGTATGAGTACATGAGCAATGGTTCATTGGCGAGCTTTCTTTTTGGGATTTCTAGGCCTCATTGGAATCAAAGAGTGCAAATTGGATTGGGAATAGCTAAAGGACTCACATACTTGCATGAAGAGTGTAACACCCAATTCATTCATTGCGATATAAAGCCTCAAAACATTCTTCTGGACGACTTATTCGCACCCAGGATATCCGATTTTGGGCTGGCAAAGCTGTTGCTGGCAGAGCAAACTCGCGCCACTAAGACGCACGCGAGAGGGACTATTGGATACTTTGCACCTGAATGGTTTACAAAAGCTTCAATCACAAGCAAAGTGGATGTTTATAGCTTTGGAGTGGTGCTGCTAGAGCTCATATGCTGCAAATCCAGTATTGTGTTTTCAATGTCAAATGATGAAGAACAAGCGCTTATAGATTGGGCATATGATTGTTACAAACATGGAAAATTGGTTCAGCTTGTTGAGAATGATGAGGAGGCAAAGAATGATATTAGGAGGGTAGAAAAACATGTTATGGTAGCAATTTGGTGCGTTCAAGATGATCCTTCACTAAGGCCTTCTATGAAGAAGGTTGCTCAAATGCTTGAGGATGTTATTGCTGTACCTTTGCCACCTCGACCTTCCATGTTTTGTTCATCATCTGCAACTTCGTTAAGTAGTGTTTCTTTTTGA 2100 0.43 MVACASMQDNGNFVLKDKDGNIVWESFEEPSDTLLPGQNFSKSQPFNLQARQSETNFSASNNFNLSWQPDGNLVLYYSQNHQEDEQTQNYAYWATGTDGRGSRLFFDEFGRIYVTDDNNTELVQVTNGNPSSTQYFYMARIESDGVFRLYDYYQKTNEEDNCSSGWKELEREPDDICVLNIAQNENFICGLNSYCVSTNGKPQCMCPDNYSYFVQPNDPNNLTSCRPDFPPPSCLVNGWETDPAKVDFQERPNLNWPFSDYELVSGDFDKYTCRERCGGDCFCAAAVYNVDKDNVAHCWKKKYPLSNGRSSTKAENGTIVFLKFRKAGSGNQHRSYLTLILSFLLGSSVFLNILLVLGILGIYMFLRKRKMLGQQLVASMAPETVRSYTYKELEKATRGFKQRLGQGAFGTVYKGVLELGSNTKRYVAIKKLDKVVEEGENEFKTEVSVIGQTHHRNLVRLLGYCDEGEHRLLVYEYMSNGSLASFLFGISRPHWNQRVQIGLGIAKGLTYLHEECNTQFIHCDIKPQNILLDDLFAPRISDFGLAKLLLAEQTRATKTHARGTIGYFAPEWFTKASITSKVDVYSFGVVLLELICCKSSIVFSMSNDEEQALIDWAYDCYKHGKLVQLVENDEEAKNDIRRVEKHVMVAIWCVQDDPSLRPSMKKVAQMLEDVIAVPLPPRPSMFCSSSATSLSSVSF 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03268 699 SUPERFAMILY alpha-D-mannose-specific plant lectins 3 97 IPR036426 -
Arst8g03268 699 ProSitePatterns Protein kinases ATP-binding region signature. 404 431 IPR017441 GO:0005524
Arst8g03268 699 ProSiteProfiles Protein kinase domain profile. 398 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g03268 699 SUPERFAMILY Protein kinase-like (PK-like) 380 671 IPR011009 -
Arst8g03268 699 Gene3D Phosphorylase Kinase; domain 1 364 477 - -
Arst8g03268 699 SUPERFAMILY alpha-D-mannose-specific plant lectins 56 151 IPR036426 -
Arst8g03268 699 FunFam S-receptor-like serine/threonine-protein kinase 367 477 - -
Arst8g03268 699 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 2 682 - -
Arst8g03268 699 Gene3D Transferase(Phosphotransferase) domain 1 478 677 - -
Arst8g03268 699 Coils Coil 626 646 - -
Arst8g03268 699 PIRSF SRK 2 698 IPR024171 GO:0004674
Arst8g03268 699 Pfam D-mannose binding lectin 4 44 IPR001480 -
Arst8g03268 699 CDD STKc_IRAK 404 672 - -
Arst8g03268 699 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 478 678 - -
Arst8g03268 699 Pfam Protein tyrosine and serine/threonine kinase 400 671 IPR001245 GO:0004672|GO:0006468
Arst8g03268 699 SMART serkin_6 398 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g03268 699 Gene3D - 35 158 IPR036426 -
Arst8g03268 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03268 Arst-Chr8 43811402 43813859 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03268 381 686 Receptor kinase-like Gene Family AT5G38280 40.575 7.35e-70 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Arst8g03268 Pkinase 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03268 - - ahf:112707732 1341.64