LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst8g03263	ATGGCAAATGATGATGTATTTCTGAGTTTTAGAGGAGGAACACGCTACCGATTCACGGATCATCTCTATCATGCTTTGCGGCGAAATGGAATCGACACGTTCAGAGATGACGAGAATCTGAGGGTAGGGGATGAACTGAGACCTGTTCTTATGAACGCAATCGAGAATTGCAAAATGGCAATAGTGGTGCTGTGTGAGAACTACGCATCTTCGACGTGGTGCCTTGATGAGTTGGTCAAGATCGTTGACTGTCACGAAAAGCAAGGGAAGCAGGTTCTGCCAATTATTTACAGAATGAAACCTTCAGATGTGTGGGAACAGAAGGGTTCCTATGAGACAGCCATGGCTAAACATGAGGATAGATATGGAAAAGACTCTGAGAAGGTCAAAGCATGGCGATTAGCTTTGTCCAAAGTAAACACGCTAAAGCTAATAAAATGGCTGCATTGCACGGAGAACACGTATGAACCGGAGTTTATCAAGAATATTGTTAGAGACACTGCTGACAGATTACCGTTGCCTGAACCAATCCAGCATGTAGTTGGACTCGATACTTGCTGTGAACAAGTAAAATCAGTGCTAAATATTGAGTCTAATGAAAATATTTGCATGTTGGGAATTTATGGACCTGGTGGAATAGGCAAAACCACATTGGCCAGATGTCTATTCGACAAGATCAAGCGGCAGTTTGAAGCTTCATGTTTTCTTGGTAATGTCAGAGAAAAATCTGAAAGTCGCGGAAGCTTAGAAAGTCTGCAAAAGACAGTTTTATATGACATGGGTGAGGAGACAATAACTGACCTTGGCAGTGAATTTAAGGGAGGATATGAAATCAAACGGAGGCTTCGCCACAAAAGAGTACTTCTAGTTCTTGATGATGTTAATTCAATAACACAATTGGAATCACTGGCTGGAGGGCATGATTGGTTTGGTTCGGGGAGCAGAATCATTATAACAACAAGGGATACTGATGTGGTAGACAAGCATGTGATGGGTGATGTTGTTACCAAGAAATACAAGATGGAGGAGCTAAATGATGATGATTCCTTGGAACTCTTTTCTTGGCATGCTTTCAACAGGAAGGAGCCTGCAGAGAACTTTAAAAATGTTTCAAGAAATGCAATAAGATATGCAAAGGGCTTTCCGCTGGCTTTAGAAGTAATAGGCTCCCACTTAGGGGGTTTTACAAGTGTGGATAGCTGGGAAGAGGAACTGCACAAGTATAGAATTGATCCAAGTATTCAAGGAGTACTTGAAATAAGCTACAATAGCTTGTATGAACTTGATCAGAAAACTTTCTTGGACATTGCTTGTTTCTTCAAAGGAGAGAAATGGGATTATGTTAAAAGGGTATTGAAAGCTTGTGACTTCTATCCAATTGTTCGAGTGTTCATTAGTAAATGTTTAATTACTGTAAATCAGAGTGGTTGCTTGGATATGCATGATCTAGTACAAGACATGGGCAAAGAGATTGTAATGAATGAGTCGCCAACAAACCCGGGTGAACGCAGCAGATTATGGTCTCATAAAGACATTCTTCAAGTACTCAAAGATGACACAGGAAGTAGCTCAATTGAAGGAATAATGCTTCACCCTTCTACACTTGAAGAAGTAAATTATTGGATTAATACTGCCTTTGACAAGATGGAGAAACTCAGAATTCTAATTGTTCGGAATACAGTATTTTCAACAGCACCAAGTCATCTTCCAAATAGTTTACGACTACTAGAGTGGAAAGGGTATCCATCAGAGTCATTCCCACTAGATTTTCATCCCCACAGAATTGTTGATCTCAAGCTACCTCACAGTGCTCTTAAATTGGAAAGGCCATTTCAGGTATTTGAGGATTTGACATTTATCAACCTCTCCCAATGTCAATCCGTTACACACATCCCGGATATGTCTGGAGCTAAAAGCCTGAGAGTCCTCACACTTGACAAATGCAATAAACTGGTAGGATTTGATGAATCCATTGGATTTATGCCAAACCTTGTATATTTGAGTGCTTCGCAATGCAGTAAGCTCAAACATTTTGTACCAGAAATGTATTTGCCGTCTCTTGAAGTGCTTTCATTTTACTTTTGTAAAAGTCTCCAAAGCTTTCCAGAAATCATGCAAGAGATGGACAAACCATTAAAGATTAACTTGGTAAATTCTGCAATCGAGGAGTTCCCAAATTCCATTGGTAATCTTACAGGGCTCGAGCATATAGACATCTCTAAATCCAAAAGACTCCGGTACCTACCAGGTAGCTTCTTGATGTTGCCCAAACTTTTCACATTGACAATAGATGGATGTTCTCTGCTTGGAAGATCATTTAAAAGGTTCAAAGGACACAGCAGTCCAAATATAAGGAGACTGAATTTCAGTGGTGCTAATCTTTCAGATGAAGATCTTCATCCAATTCTTCATGTTCATCAGAAGTTGGAAGGCATCAATGTATCAAATAATTGTTTTTCATCCCTCCCAAAATGCATTGAAGGATTTTTGCACTTGAAAATTCTTGACGTGAGTTATTGTAATAATCTTATGATAATTCCAGAACTTCCATCAAGCATTCAAAAAGTAGATGCAAGATATTGCCTATCCTTAACTCCAGGGTCCTCAACCATGCCATTGTCCAAGATTTTACAAGAGACTAAAAGAATTGAAGTTGTGATGCCAAAAAAGGAGATTCCCAATTGGCTTGACTACAATTGCAGCAAAGATATTCCTCTGTTTTGGGCTCGGCGAAAGTTTCCTGTTGTTGCTTTAGCATTCATGTTTGGGAGAGCCACTGGCAATGATATTGATGAGACATTGATGAAGGCTCTAGACTTCTGGCCTCAAATTGCTTCATCCAAATCCTACACTGTTGGTCTCAACTTGTTTATAGAAGGCCAACAAATATTTCCGGAGAAGTCCAAATATTTCAATGTTGGGGAAGATCATGTGTTACTTTTCGATCTTCGAACCTTGTTCAGTGACAAAGAGTGGCATGATCTTGATGCATATATTGGAGATGATTGGAAAGCCATTCATGTTGTATGTGAATCAACCTTAACTCTGAATCATTGGGGAGTTTATGTTTACAAGGGAGAGACAAACATGGATGATATTTATTTCAAGCATCTTCCCAACCACAAATTGTCAAGCGACTTAGTTCTAGAAAGAAGTCCACAACAAACTCGGCAAAGAATTGGACAAGTGATAGATAATTTGAATCCAACAGAAACATTTGACAATGAGCATTTGTCTCTTGTTGATCTAGAAGAAGATAGTATGAGTTTTACAAAGGCATTGGTGAGGTCGTACAAGATGGCTAAGGCTAACGAAGCTTCTTCGTCATCTAACTATGGGGCAAGTTTGAAGAAAGAATCAGAAGAATCTAATTGGGACGTGTTGCGGTTAATAGAGTTGATGAAGGAGAATGTGCCAAAAGATATTGCTGATTCAAACCCTGGTCAAATACAAGCTGTACAAGAATTCGCAGAAGAGTTTATTAAGGCACGTGCACAATTTATGATGGAGAAAGACTGCGACACGTTGAATATTGGTATGATGATTGCTTTAGAGGAATACCATATTTTTGGACCTCCAACTCGTCGTTATTGGGGAAGAATAGATTTAAAACATGCAGATGATCCAACATTCAAAGCAGTGATGAGGAGGGCATTCCAAGAATCATGGAGAATTGAAGAACGCGCCAAAGCACACAATAGAAGGATGATTCCCATTCTTCTATTGAAATGCGAGATTCCATCCATATGGGGGGAATCGTCGCAGAAGGAAGAATCCATTGATGATCCTGTATTGGAAGAATTATTGAGGCAGATAGAGAAAGATGCCATGGAATGTAACAAGTCATATGGTAAATTGAAGGCATCTATTACTTATACTAATGAACTACGAGCAGTTTCTGATGAATATTTGCTGGAAGCAACGTACATGAGAGCACATGAAAATATGGAAAATGAAGTCATGTCAGAATGGGGAAGGTTAGAATTGGCATTATGTGACATGTTCAGATCAAGAATGCGAAGATCATTGTTTGGTTGGAGAAAGCTCATGATTCCTGGAGCTAGTACTAAGAAGACCTCTTATGGGACAATTAGAGTGGCACACGAAGATCAAGACACTCATGATAATAATCGAATGCAGCATAATAAGCTGTGGCGTATCCAGATTCCAAGGTACTTTAGAAGGTCCTTTTTTTTATTTTTTTATTTTCTTTTACGGTTTCTTTATTCTGCTTTTTTGTTTTTTGTACGGGCTTTGTCTTTTACTTTTTGTTTTACTGTTTTGGTTCTTTTGGTTCTTTTACGGTCTTTTATGTTTATTTTTGTTTTTTTATTTACTTTTATTATCATGGTTTTTTTTATGCATTTTCATTTAATTTTGCTCTGTCTTGTTTTATATTTTATTTTCTATTGTCTAAGGTTCCTTTTTTTGGAAATTTGGTCTGTGGTACTTGGGATGGTCTAA	4464	0.3858	MANDDVFLSFRGGTRYRFTDHLYHALRRNGIDTFRDDENLRVGDELRPVLMNAIENCKMAIVVLCENYASSTWCLDELVKIVDCHEKQGKQVLPIIYRMKPSDVWEQKGSYETAMAKHEDRYGKDSEKVKAWRLALSKVNTLKLIKWLHCTENTYEPEFIKNIVRDTADRLPLPEPIQHVVGLDTCCEQVKSVLNIESNENICMLGIYGPGGIGKTTLARCLFDKIKRQFEASCFLGNVREKSESRGSLESLQKTVLYDMGEETITDLGSEFKGGYEIKRRLRHKRVLLVLDDVNSITQLESLAGGHDWFGSGSRIIITTRDTDVVDKHVMGDVVTKKYKMEELNDDDSLELFSWHAFNRKEPAENFKNVSRNAIRYAKGFPLALEVIGSHLGGFTSVDSWEEELHKYRIDPSIQGVLEISYNSLYELDQKTFLDIACFFKGEKWDYVKRVLKACDFYPIVRVFISKCLITVNQSGCLDMHDLVQDMGKEIVMNESPTNPGERSRLWSHKDILQVLKDDTGSSSIEGIMLHPSTLEEVNYWINTAFDKMEKLRILIVRNTVFSTAPSHLPNSLRLLEWKGYPSESFPLDFHPHRIVDLKLPHSALKLERPFQVFEDLTFINLSQCQSVTHIPDMSGAKSLRVLTLDKCNKLVGFDESIGFMPNLVYLSASQCSKLKHFVPEMYLPSLEVLSFYFCKSLQSFPEIMQEMDKPLKINLVNSAIEEFPNSIGNLTGLEHIDISKSKRLRYLPGSFLMLPKLFTLTIDGCSLLGRSFKRFKGHSSPNIRRLNFSGANLSDEDLHPILHVHQKLEGINVSNNCFSSLPKCIEGFLHLKILDVSYCNNLMIIPELPSSIQKVDARYCLSLTPGSSTMPLSKILQETKRIEVVMPKKEIPNWLDYNCSKDIPLFWARRKFPVVALAFMFGRATGNDIDETLMKALDFWPQIASSKSYTVGLNLFIEGQQIFPEKSKYFNVGEDHVLLFDLRTLFSDKEWHDLDAYIGDDWKAIHVVCESTLTLNHWGVYVYKGETNMDDIYFKHLPNHKLSSDLVLERSPQQTRQRIGQVIDNLNPTETFDNEHLSLVDLEEDSMSFTKALVRSYKMAKANEASSSSNYGASLKKESEESNWDVLRLIELMKENVPKDIADSNPGQIQAVQEFAEEFIKARAQFMMEKDCDTLNIGMMIALEEYHIFGPPTRRYWGRIDLKHADDPTFKAVMRRAFQESWRIEERAKAHNRRMIPILLLKCEIPSIWGESSQKEESIDDPVLEELLRQIEKDAMECNKSYGKLKASITYTNELRAVSDEYLLEATYMRAHENMENEVMSEWGRLELALCDMFRSRMRRSLFGWRKLMIPGASTKKTSYGTIRVAHEDQDTHDNNRMQHNKLWRIQIPRYFRRSFFLFFYFLLRFLYSAFLFFVRALSFTFCFTVLVLLVLLRSFMFIFVFLFTFIIMVFFMHFHLILLCLVLYFIFYCLRFLFLEIWSVVLGMV	1487

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst8g03263	1487	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	164	436	IPR027417	-
	Arst8g03263	1487	SMART	till_3	3	142	IPR000157	GO:0007165
	Arst8g03263	1487	SUPERFAMILY	L domain-like	537	866	-	-
	Arst8g03263	1487	Gene3D	-	168	333	IPR027417	-
	Arst8g03263	1487	Pfam	TIR domain	5	167	IPR000157	GO:0007165
	Arst8g03263	1487	Gene3D	Ribonuclease Inhibitor	714	881	IPR032675	-
	Arst8g03263	1487	Gene3D	Ribonuclease Inhibitor	530	713	IPR032675	-
	Arst8g03263	1487	SUPERFAMILY	"Winged helix" DNA-binding domain	414	517	IPR036390	-
	Arst8g03263	1487	Gene3D	-	343	426	IPR042197	-
	Arst8g03263	1487	FunFam	Disease resistance protein (TIR-NBS-LRR class)	1	172	-	-
	Arst8g03263	1487	PRINTS	Disease resistance protein signature	204	219	-	-
	Arst8g03263	1487	PRINTS	Disease resistance protein signature	281	295	-	-
	Arst8g03263	1487	PRINTS	Disease resistance protein signature	827	843	-	-
	Arst8g03263	1487	PRINTS	Disease resistance protein signature	378	392	-	-
	Arst8g03263	1487	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	5	703	IPR044974	GO:0006952
	Arst8g03263	1487	SUPERFAMILY	Toll/Interleukin receptor TIR domain	5	141	IPR035897	-
	Arst8g03263	1487	ProSiteProfiles	TIR domain profile.	2	171	IPR000157	GO:0007165
	Arst8g03263	1487	Pfam	NB-ARC domain	186	407	IPR002182	GO:0043531
	Arst8g03263	1487	Gene3D	-	2	167	IPR035897	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst8g03263	Arst-Chr8	43728224	43734559	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst8g03263	18	777	WRKY Transcription Factor Family	AT4G12020	31.226	9.90e-82	296

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst8g03263	-		-	aip:107611494	2883.2