Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03237 ATGGACAAGGGACCACCACCTGCCCTCTTTGTTAATGATGGTTCATTCATGGAGAAGTTCAAGCAACTCCAGCAAGAGCAGGAGAAGGAGAAGAATAACAAACTATCAGAGCCTAAACCTATTAAAGTTGTTTCAGGATCTTTGGCTCCTAAAACCTCCATTAGTAGGGTTAATGATACACGGAAAACTTCTCAGGCTGGTTCCAGTGGCAAACTTGCTTTCAGTCTAAAACAAAAGTCAAAGCTGGTTCCACCGCCTGTTAAGTTAGCTGATGATGAAGAAGAAGAAACAGATGCTGGGGATTTTTCAAATGCTGTACAGGCAAAACGCCAAAAAGTTGATCAGGAGGATGGCACTGCACAGCCATCAAGACAACTTGATGTTGCACCCCCAACCCCAAGTGATCCAATGGTGAAGAAAGTTGCTGACAAATTAGCAAGTTTTGTGGCTAAAAATGGAAGACAATTTGAGGACGTTACACGCCAAAAGAATCCTGGGGATACCCCTTTCAAATTTTTATTTGATCCAAGATGTTCTGACTATAAATATTATGAATATCAACTTGCTCAAGAGGAAAAGGCCCTTGCACAGTCCAGGGAATCACAAGCAAATCATAATGTTACATCCTCGGGAGGTACAGGCATTTCATCGTCTAGACCAACAAATGGCCCTCAGAGATCATCTCAGCAGCTTTCAACCTACCAAATCCCTGCTTCTGCTTTATATGAAAGTGCTGAAATATCAAGGGCTTCTGGATTTGTCAGTGCATGCGGTTGTATTTCTGTTGCAGATGAGCCTAGTGGATCATCAAATGCTGATTCTTTAGCACTAATGGAGTTCTACATGAAGAAAGCTGCACATGAAGAGAAGTTGCGACAACCTAAGCAGTCAAAGGATGAGATGCCCCCTCCTGCTTCTCTTCAAGCTTCTAATAAAAAAGGCCATCATATGGGTGATTACATTCCGCAAGAAGAGCTTGAGAAGTTCTTGGCTAGCTGTAATGATGCAGCTGCACAGAAAGCTGCAAAGGAGGCTGCAGAGAGGGCAAAAATCCAGGCTGATAATGTGGGCCACAAGCTTTTATCAAAAATGGGTTGGAAAGAAGGTGAGGGTCTAGGTGGTTCCAGGAAGGGTATTGCAGATCCTATAATGGCAGGCAATGTTAAGAAAGATAACTTGGGAGTAGGTGCTATCCAACCTGGGGAGGTTACTCCGGATGATGACATATATGAGCAGTACAAAAAGCGGATGATGCTTGGCTACCGCCATAGACCCAATCCTCTGAACAATCCTCGGAAGGCTTATTATTGA 1311 0.4355 MDKGPPPALFVNDGSFMEKFKQLQQEQEKEKNNKLSEPKPIKVVSGSLAPKTSISRVNDTRKTSQAGSSGKLAFSLKQKSKLVPPPVKLADDEEEETDAGDFSNAVQAKRQKVDQEDGTAQPSRQLDVAPPTPSDPMVKKVADKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDPRCSDYKYYEYQLAQEEKALAQSRESQANHNVTSSGGTGISSSRPTNGPQRSSQQLSTYQIPASALYESAEISRASGFVSACGCISVADEPSGSSNADSLALMEFYMKKAAHEEKLRQPKQSKDEMPPPASLQASNKKGHHMGDYIPQEELEKFLASCNDAAAQKAAKEAAERAKIQADNVGHKLLSKMGWKEGEGLGGSRKGIADPIMAGNVKKDNLGVGAIQPGEVTPDDDIYEQYKKRMMLGYRHRPNPLNNPRKAYY 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03237 436 Coils Coil 17 37 - -
Arst8g03237 436 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 62 436 IPR040169 -
Arst8g03237 436 SUPERFAMILY Surp module (SWAP domain) 117 192 IPR035967 GO:0003723|GO:0006396
Arst8g03237 436 Pfam Surp module 140 189 IPR000061 GO:0003723|GO:0006396
Arst8g03237 436 Pfam G-patch domain 354 397 IPR000467 GO:0003676
Arst8g03237 436 ProSiteProfiles SURP motif repeat profile. 141 184 IPR000061 GO:0003723|GO:0006396
Arst8g03237 436 SMART G-patch_5 351 398 IPR000467 GO:0003676
Arst8g03237 436 MobiDBLite consensus disorder prediction 48 75 - -
Arst8g03237 436 MobiDBLite consensus disorder prediction 22 37 - -
Arst8g03237 436 MobiDBLite consensus disorder prediction 194 232 - -
Arst8g03237 436 Gene3D Surp module 125 198 IPR035967 GO:0003723|GO:0006396
Arst8g03237 436 ProSiteProfiles G-patch domain profile. 353 400 IPR000467 GO:0003676
Arst8g03237 436 SMART surpneu2 139 193 IPR000061 GO:0003723|GO:0006396
Arst8g03237 436 MobiDBLite consensus disorder prediction 22 138 - -
Arst8g03237 436 MobiDBLite consensus disorder prediction 288 315 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03237 349 396 C2H2 Transcription Factor Family AT5G26610 50.000 9.02e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03237 K13096 - gmx:100786213 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g03237 8 43579612 43584920 Arst8g03237 8 43579612 43584920 ECH