Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03231 ATGGCTCAGAAAACAGAGAAAGAAGAAACGGAGTTCAAGGTTCCAGAAACCATTACCCCTTGCGTCAATAATTGTGGCTTAACAGGTAACCCAGCCACGAACAACATGTGCCAGAACTGCTTCAACGCCACCACCACCGCCGCCGCCGCCGCCGCTACCACAACTACTACAACAACAACACCGATCTCGCAGCAGCCTTCTAGATTCTCCGATGAGAAAGCCACCGCAACAGCCAGATCTGCCACGTCAACGCGTTCGCCGAAGAGATCTCACCCGTCGAACGACGAGGAGAATCCGCGAGAGGCTAATTCGGGAATGGATCGGGGTGAAACGACGTCGTCCGAGGCGAAGCGTGTCGTGAATCGGTGCTCCGGTTGCCGTAGGAGAGTTGGTCTCACCGGATTCCGGTGCCGGTGCGGAGAGCTTTTCTGCGCAGAGCACCGGTACTCAGATCGCCATGACTGCACCTACGATTACAAAGCCGCGGGAAGGGAAGCCATCGCTAGAGAGAATCCGGTGGTTAAAGCCGCGAAGATCGTTAAGGTCTGA 549 0.5574 MAQKTEKEETEFKVPETITPCVNNCGLTGNPATNNMCQNCFNATTTAAAAAATTTTTTTTPISQQPSRFSDEKATATARSATSTRSPKRSHPSNDEENPREANSGMDRGETTSSEAKRVVNRCSGCRRRVGLTGFRCRCGELFCAEHRYSDRHDCTYDYKAAGREAIARENPVVKAAKIVKV 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03231 182 SMART AN1_Zf_4 123 160 IPR000058 GO:0008270
Arst8g03231 182 Pfam A20-like zinc finger 20 42 IPR002653 GO:0003677|GO:0008270
Arst8g03231 182 FunFam Zinc finger A20 and AN1 domain-containing stress-associated protein 1 1 68 - -
Arst8g03231 182 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 21 68 - -
Arst8g03231 182 ProSiteProfiles Zinc finger A20-type profile. 15 49 IPR002653 GO:0003677|GO:0008270
Arst8g03231 182 MobiDBLite consensus disorder prediction 55 114 - -
Arst8g03231 182 ProSiteProfiles Zinc finger AN1-type profile. 117 163 IPR000058 GO:0008270
Arst8g03231 182 MobiDBLite consensus disorder prediction 89 104 - -
Arst8g03231 182 Gene3D - 1 67 - -
Arst8g03231 182 Pfam AN1-like Zinc finger 123 160 IPR000058 GO:0008270
Arst8g03231 182 PANTHER AN1-TYPE ZINC FINGER PROTEIN 19 181 - -
Arst8g03231 182 FunFam Zinc finger AN1-type containing 6 93 178 - -
Arst8g03231 182 SUPERFAMILY AN1-like Zinc finger 109 176 IPR035896 -
Arst8g03231 182 SMART A20_3 18 42 IPR002653 GO:0003677|GO:0008270
Arst8g03231 182 Gene3D - 107 168 IPR035896 -
Arst8g03231 182 MobiDBLite consensus disorder prediction 55 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03231 Arst-Chr8 43539078 43540241 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03231 8 182 C2H2 Transcription Factor Family AT3G52800 37.714 4.66e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03231 - - adu:107463072 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g03231 8 43539078 43540241 Arst8g03231 8 43539078 43540241 ECH