Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst8g03225 | ATGGCCACCGCCAAAAGCAACAGATTTTGCAAGTTCTATGCCCGTGGAACATGTTTGAAAGGGGAGCTGTGTTGCTTCTCCCATGAGAGAAATGAGGCTTCTTCAGATATTTGCTTGTTCTATCAGAAGGGCTACTGTGCTTATGGCAGTCAATGCAGGAATAGGCATGTCAAACCATCACAGGCATCAGCATCAGCTTCAGCAAATGGACCTGTATCTTTGGTTTCACAATCTGCCATGATTCATAGTGCTGCTAAGGGAAAGTTTACTTGGGTTCGGAAGGCGGATACGAAAGTGTTGTCACCAACTGACAAACACACTAGTAGCTTACAACACAAGAATCAACATTCTCAAGGGACTCATTGTGAAGTTGGTGAATCGAGCGCTCCTGCTATGCTGGATGAGAATTTGTTCTGTGAATTTGATGCGGCCAACTGCACCTCAAGGGATAAGTGTACCAAAATTCATGGAATCCTCTGCTTGTACTGCAGAAAGCCTTGTCTGCATCCAACCAATCTGGAACAAAGGTCGAACCACATGAAGATATGCAAGGAAAAGGCTGAGATAATGAAGAATAGTCAAGATATAGAATGCAGTGTTTGCCTGGAGCGCGTTCTGCGGAAGCCTAGACCATCTCAGCGCAAGTTTGGTTTGCTATCTGAATGTGACCATCCTTTCTGTTTAGACTGCATCATCAGGTGGCGCAATATGGCCCCAACCAATGCAATGGACTGCCCTGTGTGCCGCAAGCATTCATCTTTTTATGTTCAAAGTGACATTTGGTATGCTACAAAGGAAGAAAAACAGGCAATTATTGACAATTACAAGGCGAACTGCAAGTTGATTGATTGCAAGTATTTTAAATTTGGAACCAGGCAGTGCCCTCATGGAACTAGTTGTATGTATAAGCATGCTGTAAAACCTGTCTTGCGCAAACAGAGGCAAACCAGGCCACAACCTCAAATTGGAGGAGACAATCTCAACAAATATGACATCATGTCTCAGCTCAGTGAATTTGATTTGCATCCTCATGAGTTTTATTCCATCTTGAAAGACATGGAGTGGTTCGATGATATGAGTGCAATGGAGAAGATGGCTTTAGCTGATGAACTGGCTGGTCCTACTTACGGAGATTCACATTTCTTTCCCCAGGATGATTTCTTTGATAGTGATGATGATTTTGATGATGAAGATTTCGATCCTATTGATGCTGCAATATCATCAATGATGATGTCTGGTATGCCAGTATTTGGATTCAGTGATGACGAATACAGCAACAATGAAGCCAGGGATGGCAAAGACAGTGATGGCGAATCCATTGATGATGATTGA | 1332 | 0.4309 | MATAKSNRFCKFYARGTCLKGELCCFSHERNEASSDICLFYQKGYCAYGSQCRNRHVKPSQASASASANGPVSLVSQSAMIHSAAKGKFTWVRKADTKVLSPTDKHTSSLQHKNQHSQGTHCEVGESSAPAMLDENLFCEFDAANCTSRDKCTKIHGILCLYCRKPCLHPTNLEQRSNHMKICKEKAEIMKNSQDIECSVCLERVLRKPRPSQRKFGLLSECDHPFCLDCIIRWRNMAPTNAMDCPVCRKHSSFYVQSDIWYATKEEKQAIIDNYKANCKLIDCKYFKFGTRQCPHGTSCMYKHAVKPVLRKQRQTRPQPQIGGDNLNKYDIMSQLSEFDLHPHEFYSILKDMEWFDDMSAMEKMALADELAGPTYGDSHFFPQDDFFDSDDDFDDEDFDPIDAAISSMMMSGMPVFGFSDDEYSNNEARDGKDSDGESIDDD | 443 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst8g03225 | 443 | Gene3D | - | 2 | 72 | - | - | |
Arst8g03225 | 443 | SUPERFAMILY | CCCH zinc finger | 5 | 29 | IPR036855 | GO:0046872 | |
Arst8g03225 | 443 | ProSiteProfiles | Zinc finger RING-type profile. | 198 | 249 | IPR001841 | - | |
Arst8g03225 | 443 | ProSiteProfiles | Zinc finger C3H1-type profile. | 278 | 307 | IPR000571 | GO:0046872 | |
Arst8g03225 | 443 | PANTHER | MAKORIN-RELATED | 10 | 322 | IPR045072 | GO:0000209|GO:0061630 | |
Arst8g03225 | 443 | ProSitePatterns | Zinc finger RING-type signature. | 222 | 231 | IPR017907 | - | |
Arst8g03225 | 443 | MobiDBLite | consensus disorder prediction | 420 | 443 | - | - | |
Arst8g03225 | 443 | ProSiteProfiles | Zinc finger C3H1-type profile. | 32 | 59 | IPR000571 | GO:0046872 | |
Arst8g03225 | 443 | ProSiteProfiles | Zinc finger C3H1-type profile. | 4 | 31 | IPR000571 | GO:0046872 | |
Arst8g03225 | 443 | SUPERFAMILY | RING/U-box | 191 | 255 | - | - | |
Arst8g03225 | 443 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 181 | 268 | IPR013083 | - | |
Arst8g03225 | 443 | SMART | ring_2 | 198 | 248 | IPR001841 | - | |
Arst8g03225 | 443 | MobiDBLite | consensus disorder prediction | 102 | 122 | - | - | |
Arst8g03225 | 443 | Pfam | Zinc finger, C3HC4 type (RING finger) | 198 | 248 | IPR018957 | GO:0046872 | |
Arst8g03225 | 443 | SMART | c3hfinal6 | 278 | 306 | IPR000571 | GO:0046872 | |
Arst8g03225 | 443 | SMART | c3hfinal6 | 33 | 58 | IPR000571 | GO:0046872 | |
Arst8g03225 | 443 | SMART | c3hfinal6 | 6 | 30 | IPR000571 | GO:0046872 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst8g03225 | Arst-Chr8 | 43455905 | 43459622 | Dispersed/Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Arst8g03225 | zf-C3HC4 | 7.8e-07 | CL0229 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst8g03225 | K15687 | - | gmx:100788886 | 394.815 |