Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03225 ATGGCCACCGCCAAAAGCAACAGATTTTGCAAGTTCTATGCCCGTGGAACATGTTTGAAAGGGGAGCTGTGTTGCTTCTCCCATGAGAGAAATGAGGCTTCTTCAGATATTTGCTTGTTCTATCAGAAGGGCTACTGTGCTTATGGCAGTCAATGCAGGAATAGGCATGTCAAACCATCACAGGCATCAGCATCAGCTTCAGCAAATGGACCTGTATCTTTGGTTTCACAATCTGCCATGATTCATAGTGCTGCTAAGGGAAAGTTTACTTGGGTTCGGAAGGCGGATACGAAAGTGTTGTCACCAACTGACAAACACACTAGTAGCTTACAACACAAGAATCAACATTCTCAAGGGACTCATTGTGAAGTTGGTGAATCGAGCGCTCCTGCTATGCTGGATGAGAATTTGTTCTGTGAATTTGATGCGGCCAACTGCACCTCAAGGGATAAGTGTACCAAAATTCATGGAATCCTCTGCTTGTACTGCAGAAAGCCTTGTCTGCATCCAACCAATCTGGAACAAAGGTCGAACCACATGAAGATATGCAAGGAAAAGGCTGAGATAATGAAGAATAGTCAAGATATAGAATGCAGTGTTTGCCTGGAGCGCGTTCTGCGGAAGCCTAGACCATCTCAGCGCAAGTTTGGTTTGCTATCTGAATGTGACCATCCTTTCTGTTTAGACTGCATCATCAGGTGGCGCAATATGGCCCCAACCAATGCAATGGACTGCCCTGTGTGCCGCAAGCATTCATCTTTTTATGTTCAAAGTGACATTTGGTATGCTACAAAGGAAGAAAAACAGGCAATTATTGACAATTACAAGGCGAACTGCAAGTTGATTGATTGCAAGTATTTTAAATTTGGAACCAGGCAGTGCCCTCATGGAACTAGTTGTATGTATAAGCATGCTGTAAAACCTGTCTTGCGCAAACAGAGGCAAACCAGGCCACAACCTCAAATTGGAGGAGACAATCTCAACAAATATGACATCATGTCTCAGCTCAGTGAATTTGATTTGCATCCTCATGAGTTTTATTCCATCTTGAAAGACATGGAGTGGTTCGATGATATGAGTGCAATGGAGAAGATGGCTTTAGCTGATGAACTGGCTGGTCCTACTTACGGAGATTCACATTTCTTTCCCCAGGATGATTTCTTTGATAGTGATGATGATTTTGATGATGAAGATTTCGATCCTATTGATGCTGCAATATCATCAATGATGATGTCTGGTATGCCAGTATTTGGATTCAGTGATGACGAATACAGCAACAATGAAGCCAGGGATGGCAAAGACAGTGATGGCGAATCCATTGATGATGATTGA 1332 0.4309 MATAKSNRFCKFYARGTCLKGELCCFSHERNEASSDICLFYQKGYCAYGSQCRNRHVKPSQASASASANGPVSLVSQSAMIHSAAKGKFTWVRKADTKVLSPTDKHTSSLQHKNQHSQGTHCEVGESSAPAMLDENLFCEFDAANCTSRDKCTKIHGILCLYCRKPCLHPTNLEQRSNHMKICKEKAEIMKNSQDIECSVCLERVLRKPRPSQRKFGLLSECDHPFCLDCIIRWRNMAPTNAMDCPVCRKHSSFYVQSDIWYATKEEKQAIIDNYKANCKLIDCKYFKFGTRQCPHGTSCMYKHAVKPVLRKQRQTRPQPQIGGDNLNKYDIMSQLSEFDLHPHEFYSILKDMEWFDDMSAMEKMALADELAGPTYGDSHFFPQDDFFDSDDDFDDEDFDPIDAAISSMMMSGMPVFGFSDDEYSNNEARDGKDSDGESIDDD 443
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03225 443 Gene3D - 2 72 - -
Arst8g03225 443 SUPERFAMILY CCCH zinc finger 5 29 IPR036855 GO:0046872
Arst8g03225 443 ProSiteProfiles Zinc finger RING-type profile. 198 249 IPR001841 -
Arst8g03225 443 ProSiteProfiles Zinc finger C3H1-type profile. 278 307 IPR000571 GO:0046872
Arst8g03225 443 PANTHER MAKORIN-RELATED 10 322 IPR045072 GO:0000209|GO:0061630
Arst8g03225 443 ProSitePatterns Zinc finger RING-type signature. 222 231 IPR017907 -
Arst8g03225 443 MobiDBLite consensus disorder prediction 420 443 - -
Arst8g03225 443 ProSiteProfiles Zinc finger C3H1-type profile. 32 59 IPR000571 GO:0046872
Arst8g03225 443 ProSiteProfiles Zinc finger C3H1-type profile. 4 31 IPR000571 GO:0046872
Arst8g03225 443 SUPERFAMILY RING/U-box 191 255 - -
Arst8g03225 443 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 181 268 IPR013083 -
Arst8g03225 443 SMART ring_2 198 248 IPR001841 -
Arst8g03225 443 MobiDBLite consensus disorder prediction 102 122 - -
Arst8g03225 443 Pfam Zinc finger, C3HC4 type (RING finger) 198 248 IPR018957 GO:0046872
Arst8g03225 443 SMART c3hfinal6 278 306 IPR000571 GO:0046872
Arst8g03225 443 SMART c3hfinal6 33 58 IPR000571 GO:0046872
Arst8g03225 443 SMART c3hfinal6 6 30 IPR000571 GO:0046872
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Arst8g03225 Arst-Chr8 43455905 43459622 Dispersed/Tandem
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Arst8g03225 zf-C3HC4 7.8e-07 CL0229
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03225 K15687 - gmx:100788886 394.815