Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03214 ATGAGGAAACCGGATAATAATATGGGGAAGGACAAAATGGGAAATAGCAACACTATTATTAAGAGCAAGCTTAGAAAGGGTTTGTGGTCACCTGAGGAAGATGAGAAGCTATTAAGGTACATGCTCACCAGTGGACAAGGTTGTTGGACCGACATTGCGCAACGGTGCGGCAAGAGTTGCCGCCTCCGTTGGATTAACTACCTAAGGCCGGACCTTAAGCGCGGCGCTTTTTCGCCGCAAGAAGAAGATCTCATTGTTCATTTACATTCCATTCTTGGCAACAGGTGGTCTCAGATAGCAGCACGTTTACCTGGGCGTACAGACAATGAGATAAAGAATTTCTGGAACTCCACACTCAAGAAAAGATTCAAACTCAGCACCAATAACACCCCTTCACCAAACAACAACAATAGTAGCAGTGATGACTCTTCATCAGATCCTAATAATGCTAATGGAATCATGATGGTGCACCTCAATGAACAACATCATGATCTCATGCCCATGTCAATGTGCATGGACTCATCATATTCTTCATCTTCAACTTCTTCATCAATCTCATCCATGCATCAACAACAAGCAGCACCAATGGTTTTTTCTGACCCATTTTCTATCTTGATAAATAATAATAATAATGATGTGCCTCAATGCTTGATGACCCAATTTGGTGGCATGGTAGAGGAGGGGCATAATGGGAATTATGGAATTATCGGGTCTAACAATAAAATAGGGCTAGAAAGAGAGTTGTCCCTTCCTCCACTAGAAAGTGACAATAATGCCCCTATTATTGATGTGAAAAACCATAACAACCATTTCAATCATCATCATCATAGTAGTTGCTTCAATAATGCTAATCATCAAATTCATCAGAAGGTTTCCAAGGTGGAGGAATTGTTCGGGTTTGGAAATAATAACAATAGTGATCATCATGGGCATCAGCAATTGCATCAAGGGGAAAACTTGAAAATTGGAGAATGGGATTTGGAGGAT 987 0.4093 MRKPDNNMGKDKMGNSNTIIKSKLRKGLWSPEEDEKLLRYMLTSGQGCWTDIAQRCGKSCRLRWINYLRPDLKRGAFSPQEEDLIVHLHSILGNRWSQIAARLPGRTDNEIKNFWNSTLKKRFKLSTNNTPSPNNNNSSSDDSSSDPNNANGIMMVHLNEQHHDLMPMSMCMDSSYSSSSTSSSISSMHQQQAAPMVFSDPFSILINNNNNDVPQCLMTQFGGMVEEGHNGNYGIIGSNNKIGLERELSLPPLESDNNAPIIDVKNHNNHFNHHHHSSCFNNANHQIHQKVSKVEELFGFGNNNNSDHHGHQQLHQGENLKIGEWDLED 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03214 329 SUPERFAMILY Homeodomain-like 24 115 IPR009057 -
Arst8g03214 329 CDD SANT 76 119 IPR001005 -
Arst8g03214 329 CDD SANT 29 68 IPR001005 -
Arst8g03214 329 ProSiteProfiles Myb-like domain profile. 21 68 IPR001005 -
Arst8g03214 329 SMART sant 25 70 IPR001005 -
Arst8g03214 329 SMART sant 73 121 IPR001005 -
Arst8g03214 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 123 IPR017930 -
Arst8g03214 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 68 IPR017930 -
Arst8g03214 329 MobiDBLite consensus disorder prediction 125 152 - -
Arst8g03214 329 Gene3D - 75 149 - -
Arst8g03214 329 MobiDBLite consensus disorder prediction 299 319 - -
Arst8g03214 329 FunFam MYB transcription factor 23 74 - -
Arst8g03214 329 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Arst8g03214 329 Gene3D - 23 74 - -
Arst8g03214 329 FunFam Transcription factor MYB46 75 146 - -
Arst8g03214 329 PANTHER MYB DOMAIN PROTEIN 55 17 292 - -
Arst8g03214 329 Pfam Myb-like DNA-binding domain 26 68 IPR001005 -
Arst8g03214 329 Pfam Myb-like DNA-binding domain 74 118 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03214 Arst-Chr8 43299890 43303945 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03214 1 328 MYB Transcription Factor Family AT3G08500 45.634 6.47e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst8g03214 Myb_DNA-binding 1.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03214 K09422 - gmx:100784755 288.5