Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst8g03199 | ATGCCAGGAAAACCCGAATCAGACGAGTGGCGGGCGAAGCGAAGCCAGCAGATTCAGTTTCAAGCTTCCATTTATGCTCAGCCCTGGTGGCGCGGCGGAGCTGGTGAGAATTCCCCAAAATCATCATCAGTAGATCAGCAGTTGAATGGTTCATCAGCCATGAATGGTGGCACAATCACAACACAATCAGAGACTAATGAAGTTGTTGGTTTCAATAAACAGATGCAGTCGTTGATTTCTCAATCACTACCTGGAATTGATAACTCAGGTGAAGATGTTACCAAAGAGCACCAGAACATCAAACATGCTTTTTCCTCAACCCCATTTACCATGGTAAAACACCTTGGTCCGAATTCCGAGAATGAAAGCATTGGTCATTCAATTGTTTTAACTTCGCAAGCTTATTTTGATGCACATTATGGTGGAGGCTTGACACCCTATGGGCAACAAACTATGATAAACCCTCAGCTGTATGGGATGAACCATGCTAGAATGCTTTTGCCACTTGAAATGGAAGAGGAGCCGGTTTATGTCAATGCAAAGCAGTATCATGGTATTCTGAGAAGAAGACAGTCACGTGCTAAGGCCGAGCTCGAAAAGAAAGTGATTAAAGTTAGAAAGCCATATCTTCATGAGTCGCGTCACCTTCATGCTATGAGAAGGGCAAGGGGTAATGGTGGTCGCTTTCTTAATACAAAGAAGCTTGAAGGCAACAACAACAACAGTATAAACCCCTCAATGGAATCCGGAAGCTCCCTTTCCACGGCTACTTTACATTCCAACAATGATCACTATGTTGTGTCGCAGTCCATGGTTCACGACATGGAGAAAATGCAGAATTTCACCATTGGTTTCCATGGTAGCAATGGTCTGTCCTCAATGTACCATTCACAGTTTAATGGAAGAAATGAGGGACATTGCTTTGGTGGAGAAAGGCAAGGCATGCTTATGCATGGAGCCCCAAATGGGGCTATTGAATGA | 981 | 0.4414 | MPGKPESDEWRAKRSQQIQFQASIYAQPWWRGGAGENSPKSSSVDQQLNGSSAMNGGTITTQSETNEVVGFNKQMQSLISQSLPGIDNSGEDVTKEHQNIKHAFSSTPFTMVKHLGPNSENESIGHSIVLTSQAYFDAHYGGGLTPYGQQTMINPQLYGMNHARMLLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKVRKPYLHESRHLHAMRRARGNGGRFLNTKKLEGNNNNSINPSMESGSSLSTATLHSNNDHYVVSQSMVHDMEKMQNFTIGFHGSNGLSSMYHSQFNGRNEGHCFGGERQGMLMHGAPNGAIE | 326 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst8g03199 | 326 | MobiDBLite | consensus disorder prediction | 36 | 59 | - | - | |
Arst8g03199 | 326 | SMART | cbf3 | 171 | 232 | IPR001289 | GO:0003700|GO:0006355 | |
Arst8g03199 | 326 | ProSitePatterns | NF-YA/HAP2 subunit signature. | 177 | 197 | IPR018362 | GO:0003677|GO:0016602 | |
Arst8g03199 | 326 | MobiDBLite | consensus disorder prediction | 30 | 59 | - | - | |
Arst8g03199 | 326 | MobiDBLite | consensus disorder prediction | 227 | 254 | - | - | |
Arst8g03199 | 326 | ProSiteProfiles | NF-YA/HAP2 family profile. | 172 | 232 | IPR001289 | GO:0003700|GO:0006355 | |
Arst8g03199 | 326 | PANTHER | TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED | 38 | 280 | IPR001289 | GO:0003700|GO:0006355 | |
Arst8g03199 | 326 | PRINTS | CCAAT-binding transcription factor subunit B signature | 206 | 229 | IPR001289 | GO:0003700|GO:0006355 | |
Arst8g03199 | 326 | PRINTS | CCAAT-binding transcription factor subunit B signature | 175 | 197 | IPR001289 | GO:0003700|GO:0006355 | |
Arst8g03199 | 326 | MobiDBLite | consensus disorder prediction | 232 | 254 | - | - | |
Arst8g03199 | 326 | Gene3D | - | 172 | 233 | - | - | |
Arst8g03199 | 326 | Pfam | CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B | 174 | 229 | IPR001289 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst8g03199 | Arst-Chr8 | 43160102 | 43165988 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst8g03199 | 21 | 237 | CCAAT-HAP2 Transcription Factor Family | AT5G12840 | 40.351 | 1.98e-42 | 146 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NF-YA | Arst8g03199 | CBFB_NFYA | 2.8e-26 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst8g03199 | K08064 | - | gmx:100782085 | 363.229 |