LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst8g03173	ATGGCTATCCCTCTGGTGGTTACCGTTCTCTTGGCCTTAGCCTCCACCATAACGCCGCGGACGACCTCGGCCGCGTTCGTCCCCCGAGACAACTACCTGATCGATTGTGGCTCGGAAACCGGAACCACCCTCCCAGACGGAAGAACATTCAAATCAGACCCACAAGCCAACACTTACTTGCAAGCCAATGATCAAAACAAGGTATCAATAGAAAATGGCAATAATAACCCTGATCTCCCAAATCAATTGTACTCAAGTGCAAGAATCTTCATGCAAGAAGCCAAGTACTCCTTCCATTTAATCCAACCGGGTTACCATTGGGTTCGCCTTTATTTCTACCCGATCAAGAACAATATCTTTGATCTCCAAAAAGCCACTTTCTCTGTTAACGCCTATAAATACGTTCTTCTCCATAGCTTCAATGTTAACAACAATGACAAGCCAATTCTCAAGGAGTACCTCATTAATGCAAATGAACCCATCTTCACGCTCTCTTTTACTCCGTTGAAGAACTCAGCTGCATTTATCAATGCCATAGAAATCGTATCCGTCCCGGACAACCTTCTATTCGACTCCGGCTCGAACCTTTTCCCGGTCGGCGATTACTCCGGCCTGACTAACCACGCTTTCCAGCCGGTTTACAGGATCAACAACGGCGGACCTCTTGTCACCGCTACAAACGACACTTTAGGACGGAATTGGGAGAACGACGAGCCTTATATAACGGTGAAGAACGCAGCCATGAGTGTCGTTGTACCTACAAACATTATCAAGTACCCTACGAATAATCCAAATATCTCTCCACTTATTGCTCCGCCTACGGTTTACGCCTCGGCGACGGAGATGACTAACGACTCTGCAGTGGATCAGCCGAATTTCAATATAACTTGGAAGTTTGATGTGGATACTTCTTTTAGCTACCTTGTAAGGTTGCATTTCTGCGACATTGTAAGCAAAGGTTTGAACGAGCTTTACTTCAACGTCTACATCAACGAGAAAACCGCGATTCCGACGCTTGATTTGTCCAGCATTACGCAAGCCTTGGCGACTCCTTATTACAGAGATTTTGTTGTGAATGCGACGTTGATGTCTCAGGAAGGACTAAAGATTCAGGTGGGAGCATCGCTGGCGCGAGGAGGAAGCGGGAACGCGATCGTGAATGGAATAGAGATCTTGAAGATAAGTAACTCTTTGGACAGTTTGGATGGCCAATTCGGCCTTGTTGGGAGCAATGGCGGTGGTAGCTCTTACCGCGGCGCGGTGGCCGGGGTTGGATTCGCGATGATGTTTGGAGCGTTTGTTGGACTTGGCGCCATGGTGATCAAGTGGCACAAGAGGCCTCAAGATTGGCAGAAACGGAACAGTTTTTCGTCGTGGTTGCTTCCGGTGCACGCCGGAGATAGTACCTTTATGAGCAAGAATGCGTCAGGGAAGAGCAATTTCTCTGCCACTATGGGTTTAGGCCGGTTCTTCTCTTTGGCGGAGCTGCAAGAGGCAACTAATAACTTCGATAAAGCAAACATTATCGGTGTTGGTGGATTCGGCAATGTGTATTCCGGCGTCATTGAGGATGCGACTCAAGTTGCGGTGAAGAGAGGAAATCCGCAATCGGAACAGGGGATTAACGAATTCCAGACGGAGATTCAAATGTTGTCTAAGCTTAGGCACAGGCATTTGGTTTCTCTTATTGGATACTGCGACGAAAACGATGAAATGATTTTGGTTTATGAGTACATGCCTAATGGACACTTTAGGGACCATCTTTATGGCAAGAACATGGTCGGACCACCGCTTTCTTGGAAGCAAAGATTGGAAATCTGTATCGGAGCTGCTCGCGGTCTTCATTATCTTCACACCGGCACGGCACAAGGTATCATCCATCGCGACGTTAAGACCACTAACATATTGCTTGACGAGAATTTCACGGCCAAGGTTTCTGATTTTGGTTTATCAAAGGATGCACCTATGGGGCAGGGTCATGTCAGTACGGCGGTTAAGGGTAGTTTTGGGTATTTGGATCCTGAATACTTCAGGAGACAACAATTGACAGAAAAATCTGATGTCTATTCATTTGGAGTGGTGCTTCTTGAGGCCTTATGTGCAAGGCCTGCTATTAATCCTCAGTTACCCCGCGAACAAGTAAACTTGGCTGATTGGGCTATGCAATGGAAGAGAAAGGGATTGCTTGATAAGATCATTGATCCTAATCTTGTCGGCACCATTAACCCCGAATCGTTGAAGAAGTACGCCGAGGCGGCCGAGAAGTGCTTGGCTGATCATGGTGTTGATAGGCCTTCAATGGGAGATGTGCTTTGGAATTTAGAGTATGCTTTGCAGCTTCAAGAGGCCTTCACACAAGAAGGAAAGGCAGAGGATGAGACTCCGGCTGTCGCAGCCTCAGCCTCATCCCCAGCCTCAGCCCCAGCCTCGGCTGTTCTGCCTCCGGCCGCTCCTGCGTCTTCTAATGCCTTAGATGAGGCTGTCCCTGTTCCAGAAGGAAATAACCTCCCGGCCGAAACCCGGGCGATTGATGACCATTCTGGAACTTTGCAGTTTGCTAGGTTTAGCCTTAATGGCAGGTGA	2583	0.4789	MAIPLVVTVLLALASTITPRTTSAAFVPRDNYLIDCGSETGTTLPDGRTFKSDPQANTYLQANDQNKVSIENGNNNPDLPNQLYSSARIFMQEAKYSFHLIQPGYHWVRLYFYPIKNNIFDLQKATFSVNAYKYVLLHSFNVNNNDKPILKEYLINANEPIFTLSFTPLKNSAAFINAIEIVSVPDNLLFDSGSNLFPVGDYSGLTNHAFQPVYRINNGGPLVTATNDTLGRNWENDEPYITVKNAAMSVVVPTNIIKYPTNNPNISPLIAPPTVYASATEMTNDSAVDQPNFNITWKFDVDTSFSYLVRLHFCDIVSKGLNELYFNVYINEKTAIPTLDLSSITQALATPYYRDFVVNATLMSQEGLKIQVGASLARGGSGNAIVNGIEILKISNSLDSLDGQFGLVGSNGGGSSYRGAVAGVGFAMMFGAFVGLGAMVIKWHKRPQDWQKRNSFSSWLLPVHAGDSTFMSKNASGKSNFSATMGLGRFFSLAELQEATNNFDKANIIGVGGFGNVYSGVIEDATQVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSLIGYCDENDEMILVYEYMPNGHFRDHLYGKNMVGPPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFTAKVSDFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPQLPREQVNLADWAMQWKRKGLLDKIIDPNLVGTINPESLKKYAEAAEKCLADHGVDRPSMGDVLWNLEYALQLQEAFTQEGKAEDETPAVAASASSPASAPASAVLPPAAPASSNALDEAVPVPEGNNLPAETRAIDDHSGTLQFARFSLNGR	860

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst8g03173	860	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	625	637	IPR008271	GO:0004672\|GO:0006468
	Arst8g03173	860	ProSitePatterns	Protein kinases ATP-binding region signature.	509	531	IPR017441	GO:0005524
	Arst8g03173	860	FunFam	Putative receptor-like protein kinase	31	185	-	-
	Arst8g03173	860	ProSiteProfiles	Protein kinase domain profile.	503	777	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst8g03173	860	SUPERFAMILY	Protein kinase-like (PK-like)	488	772	IPR011009	-
	Arst8g03173	860	SMART	serkin_6	503	777	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst8g03173	860	Pfam	Protein tyrosine and serine/threonine kinase	507	703	IPR001245	GO:0004672\|GO:0006468
	Arst8g03173	860	Pfam	Malectin-like domain	34	393	IPR024788	-
	Arst8g03173	860	Gene3D	Phosphorylase Kinase; domain 1	467	578	-	-
	Arst8g03173	860	FunFam	receptor-like protein kinase FERONIA	467	578	-	-
	Arst8g03173	860	Gene3D	-	31	184	-	-
	Arst8g03173	860	Gene3D	-	210	396	-	-
	Arst8g03173	860	FunFam	Receptor-like protein kinase FERONIA	579	793	-	-
	Arst8g03173	860	CDD	STKc_IRAK	509	775	-	-
	Arst8g03173	860	MobiDBLite	consensus disorder prediction	786	836	-	-
	Arst8g03173	860	FunFam	Receptor-like protein kinase FERONIA	209	396	-	-
	Arst8g03173	860	PANTHER	OS07G0166700 PROTEIN	489	781	IPR045272	GO:0004714\|GO:0006468
	Arst8g03173	860	Gene3D	Transferase(Phosphotransferase) domain 1	579	801	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst8g03173	Arst-Chr8	42807629	42810211	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst8g03173	25	860	Receptor kinase-like Gene Family	AT4G39110	64.775	0.0	1100

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Arst8g03173		Malectin_like	3.1e-34	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst8g03173	-		-	gmx:100790759	1302.73