Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03117 ATGGCATCTTCAAATTCACCATGCGCAGCATGCAAATTTCTTCGAAGAAAATGCCAACCAGAGTGCGCTTTTGCACCATACTTCCCACCAGATCAGCCTCAGAAGTTCGCGAATGTTCATAGAATCTTCGGTGCAAGCAATGTTACAAAGCTTCTCAACGATTTACACCCTCACCAGCGCGAAGACGCCGTGAATTCCCTCGCGTACGAGGCGGAGATGCGCCTTCGCGACCCAGTCTATGGTTGCGTCGGCGTCATCTCCCTCCTCCAGCACCAGCTCCGGCAGCTCCAGGTGGATCTTTACTGCGCTAAATCGGAGCTATCTAGGTACCAAAATTTGAGTATCAACACCAACCACGCCTTCGTTGGTAGTGAATCTGGTGCCGTGGGATACCAGCATCAGCAGAATAATAATTCTGGTTCTGCTGGTGTTGGAACCCGCGACAACAGCAATTACTACCAACACCATCACCATCACCACCACCATCAATTCTTTCCGCAACAACAGATGGTAAGAAGTTTTGATGGAGGGAGCAATTATGATGCTAGTCTCTTGGCTATGAACATCTCCGCTAGCTTAGGGCAGCTCAATCAGCTTCCGGCTGGCGGCGGTGACGACCGCCGCACCGTCAACAACCCTTCCTAG 645 0.5116 MASSNSPCAACKFLRRKCQPECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQVDLYCAKSELSRYQNLSINTNHAFVGSESGAVGYQHQQNNNSGSAGVGTRDNSNYYQHHHHHHHHQFFPQQQMVRSFDGGSNYDASLLAMNISASLGQLNQLPAGGGDDRRTVNNPS 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03117 214 MobiDBLite consensus disorder prediction 130 150 - -
Arst8g03117 214 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Arst8g03117 214 MobiDBLite consensus disorder prediction 130 164 - -
Arst8g03117 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 159 - -
Arst8g03117 214 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03117 Arst-Chr8 42329427 42330897 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03117 2 214 AS2 family AT1G65620 60.465 4.02e-77 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst8g03117 LOB 3e-42 No_clan