Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03079 ATGGATGAAAAGCACCGAACCGTCGCGTCCCTTGTATCGAAGCTAAGCTCCGTATCCGAACGAACCCGAATCGACGCGCTCATCGAGCTTCGTCAGATGTCGAAGCTCGACCCGGAAACCCGCCCCATAATTGCCGAAGCTGGCGCCATCCCTTTCCTCGCTGAAACTCTCTACTCTTCCTCTCATCCTTCCCAAGAAAACGCCGCCGCCACGCTCTTAAACCTTTCCATCTCCGCAAAGGAACCGCTGGTTTCCACGCGCGGTGTCCTCGACGCCATAGCGCACGTGATCTCCCATCACAGCTCCTCCTCCTCCGCCTCCGCCGTCCAATCCGCCGCAGCCACAATCCACAGCCTCCTCGCCGCCACCGACGACTACCGCCCTTCCGTCGGCGCCAAGCGCGACATCGTCTACGCGCTTGTGGACATCCTCCGGTGCCACGTGTCGTCCCCTCCGAGAACCATCAAAGACGCGCTGAAGGCGCTGTTCGGCATTGCGCTGTACCCTCCGAACCGCGCCACGATGGTGCATCTTGGAGTGATCCCCGCGCTTTTCGCCCTTGTGGTGAAGGACGGGCGCGTGGGGATCGTCGAGGACACCACCGCGGTGATCGCGCAAGTAGCCGGGTGCGAGGAGAGCGGCGAGGCCTTCCGGAAGGTCGCCGGGGTTGGGGTTCTCGCCGATCTCCTCGACTTGTCTACCGGCGCCAGTATGCGTAGCAAGGAGAATGCCGTCTCGGCGTTGCTGAATTTGGCGCGGTGCGGTGGCGAGAGCGTTGTGGCAGAGGTCAGGGAGGCGCTTGCGAATATTGCGGCCGATGGGATCGATGATGTCGAGGATAATGGAAGCGCCAAGGGGAAGAACAAAGCGAAGTTGTTGAAGGTTTTGTTTGGTGATGATGATGTTAATGATAATAACAGTAGCAACAGCGTTTTGAGTTCGGGTGGAGGTTCGCAGTTTGATTCATTCTAG 972 0.5936 MDEKHRTVASLVSKLSSVSERTRIDALIELRQMSKLDPETRPIIAEAGAIPFLAETLYSSSHPSQENAAATLLNLSISAKEPLVSTRGVLDAIAHVISHHSSSSSASAVQSAAATIHSLLAATDDYRPSVGAKRDIVYALVDILRCHVSSPPRTIKDALKALFGIALYPPNRATMVHLGVIPALFALVVKDGRVGIVEDTTAVIAQVAGCEESGEAFRKVAGVGVLADLLDLSTGASMRSKENAVSALLNLARCGGESVVAEVREALANIAADGIDDVEDNGSAKGKNKAKLLKVLFGDDDVNDNNSSNSVLSSGGGSQFDSF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03079 323 SMART arm_5 37 77 IPR000225 GO:0005515
Arst8g03079 323 SMART arm_5 210 253 IPR000225 GO:0005515
Arst8g03079 323 SMART arm_5 168 209 IPR000225 GO:0005515
Arst8g03079 323 FunFam ARM repeat superfamily protein 2 301 - -
Arst8g03079 323 SUPERFAMILY ARM repeat 7 279 IPR016024 -
Arst8g03079 323 Gene3D - 1 286 IPR011989 -
Arst8g03079 323 PANTHER U BOX DOMAIN-CONTAINING 7 293 - -
Arst8g03079 323 Pfam Armadillo/beta-catenin-like repeat 37 76 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03079 Arst-Chr8 41954352 41956026 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03079 1 297 U-box Gene Family AT2G23140 31.208 8.49e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03079 - - gmx:100787115 419.083